RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 PTPN3P26045 913 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 GRM5P41594 1212 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 NR2C2P49116 596 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 TAF6P49848 677 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 RAP1GDS1P52306 607 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 NRF1Q16656 503 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 GEN1Q17RS7 908 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 PKDCCQ504Y2 493 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 FBXO48Q5FWF7 155 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 ARL13AQ5H913 290 aaPredicted RBP13.2□□□□□ -0.3
SEC23B-201ENST00000262544 TAPT1Q6NXT6 567 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 ARRDC4Q8NCT1 418 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 PHF21BQ96EK2 531 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 VPS39Q96JC1 886 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 GORASP1Q9BQQ3 440 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 TKTL2Q9H0I9 626 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 PLEKHA5Q9HAU0 1116 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 STAP1Q9ULZ2 295 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 GSTT1P30711 240 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 FDFT1P37268 417 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 ART3Q13508 389 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 CYTH1Q15438 398 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 SLC25A52Q3SY17 297 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 ARCQ7LC44 396 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 SATL1Q86VE3 508 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 MYLK4Q86YV6 388 aaPredicted RBP13.2□□□□□ -0.3
SEC23B-201ENST00000262544 B4GALNT2Q8NHY0 566 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 RTP4Q96DX8 246 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 SNX27Q96L92 541 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 MORF4L1Q9UBU8 362 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 PPME1Q9Y570 386 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 TLL2Q9Y6L7 1015 aa13.2□□□□□ -0.3
SEC23B-201ENST00000262544 BIRC5O15392 142 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 MYL3P08590 195 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 LILRA4P59901 499 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 KLF10Q13118 480 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 FLOT2Q14254 428 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 ANKRD20A4Q4UJ75 823 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 CYP2R1Q6VVX0 501 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 SLC10A4Q96EP9 437 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 IFT43Q96FT9 208 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 PAAF1Q9BRP4 392 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 ACE2Q9BYF1 805 aaPredicted RBP13.19□□□□□ -0.3
SEC23B-201ENST00000262544 LRRC40Q9H9A6 602 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 ARHGAP26Q9UNA1 814 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 HTTP42858 3142 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 LCTP09848 1927 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 ZNF638Q14966 1978 aaKnown RBP13.19□□□□□ -0.3
SEC23B-201ENST00000262544 YBX3P16989 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
SEC23B-201ENST00000262544 CHRNA4P43681 627 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 CCNA1P78396 465 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 NIPAL4Q0D2K0 466 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 TUBB3Q13509 450 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.19□□□□□ -0.3
SEC23B-201ENST00000262544 GPC2Q8N158 579 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 ICA1LQ8NDH6 482 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 GPRC5AQ8NFJ5 357 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 DNAJC1Q96KC8 554 aaKnown RBP13.19□□□□□ -0.3
SEC23B-201ENST00000262544 KLHL4Q9C0H6 718 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 WDCPQ9H6R7 721 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 OR12D3Q9UGF7 316 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 SLC2A6Q9UGQ3 507 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 UBQLN1Q9UMX0 589 aaKnown RBP13.19□□□□□ -0.3
SEC23B-201ENST00000262544 DOCK1Q14185 1865 aa13.19□□□□□ -0.3
SEC23B-201ENST00000262544 MSI1O43347 362 aaKnown RBP13.18□□□□□ -0.3
SEC23B-201ENST00000262544 TRIM13O60858 407 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 PRKCGP05129 697 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 MAGEA3P43357 314 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 CNGA3Q16281 694 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 LSM12Q3MHD2 195 aaKnown RBP13.18□□□□□ -0.3
SEC23B-201ENST00000262544 MARK2Q7KZI7 788 aaKnown RBP13.18□□□□□ -0.3
SEC23B-201ENST00000262544 TNIP3Q96KP6 325 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 GAD1Q99259 594 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 ILKAPQ9H0C8 392 aaPredicted RBP13.18□□□□□ -0.3
SEC23B-201ENST00000262544 XPR1Q9UBH6 696 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 DPYSL4O14531 572 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 NPR3P17342 541 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 PTPN1P18031 435 aaKnown RBP13.18□□□□□ -0.3
SEC23B-201ENST00000262544 XRCC1P18887 633 aaPredicted RBP13.18□□□□□ -0.3
SEC23B-201ENST00000262544 AOC1P19801 751 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 PTPN9P43378 593 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 PITRM1Q5JRX3 1037 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 SREK1Q8WXA9 508 aaKnown RBP13.18□□□□□ -0.3
SEC23B-201ENST00000262544 GATA6Q92908 595 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 WNT8BQ93098 351 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 LRGUKQ96M69 825 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 TMEM30AQ9NV96 361 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 ZDHHC2Q9UIJ5 367 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 TSR3Q9UJK0 312 aaKnown RBP13.18□□□□□ -0.3
SEC23B-201ENST00000262544 PRRC2BQ5JSZ5 2229 aaKnown RBP13.18□□□□□ -0.3
SEC23B-201ENST00000262544 AURKAO14965 403 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 FAM200BP0CF97 657 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 SERPINB8P50452 374 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 THOP1P52888 689 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 MAXP61244 160 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 RALGDSQ12967 914 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 CSHL1Q14406 222 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 DGKDQ16760 1214 aa13.18□□□□□ -0.3
SEC23B-201ENST00000262544 NOL9Q5SY16 702 aaKnown RBP13.18□□□□□ -0.3
SEC23B-201ENST00000262544 CLEC20AQ6ZU45 233 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms