RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SLC2A13Q96QE2 648 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 GATA5Q9BWX5 397 aaPredicted RBP16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 NMRAL1Q9HBL8 299 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 CRTAC1Q9NQ79 661 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.268e-7■■□□□ 12.2
TM9SF1-201ENST00000261789 CYP2B6P20813 491 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 EPHA3P29320 983 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 MSX2P35548 267 aaPredicted RBP16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 MPP3Q13368 585 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 KCTD11Q693B1 232 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 SPATA6LQ8N4H0 392 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 SMG8Q8ND04 991 aaKnown RBP16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 APBA2Q99767 749 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 ZNF408Q9H9D4 720 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 CASS4Q9NQ75 786 aa16.69■□□□□ 0.26
TM9SF1-201ENST00000261789 MYBPHLA2RUH7 354 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 AIM2O14862 343 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 PNPLA4P41247 253 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 AQP4P55087 323 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 KLF10Q13118 480 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 GRM3Q14832 879 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 OTOP3Q7RTS5 596 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 GPR142Q7Z601 462 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 NPLOC4Q8TAT6 608 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 VPS39Q96JC1 886 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 DNAJB4Q9UDY4 337 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 PDCD11Q14690 1871 aaKnown RBP16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 RRN3P2A6NIE6 340 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 PTGESO14684 152 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 JCHAINP01591 159 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 KCNE1P15382 129 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 RAG1P15918 1043 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 WARSP23381 471 aaKnown RBP16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 IRX1P78414 480 aaPredicted RBP16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 PPIDQ08752 370 aaKnown RBP16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 ZNF460Q14592 562 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 CLEC14AQ86T13 490 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 ISL2Q96A47 359 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 SLC10A4Q96EP9 437 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 SMOQ99835 787 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 TINF2Q9BSI4 451 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 TASP1Q9H6P5 420 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 PAPOLBQ9NRJ5 636 aaKnown RBP16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 CDY2AQ9Y6F7 541 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 CDY1Q9Y6F8 540 aa16.68■□□□□ 0.26
TM9SF1-201ENST00000261789 TSC2P49815 1807 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 SF3B1O75533 1304 aaKnown RBP eCLIP16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 BTBD19C9JJ37 291 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 TRIM13O60858 407 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 AP1G2O75843 785 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 FAM200BP0CF97 657 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 HOXD8P13378 290 aaPredicted RBP16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 BTKQ06187 659 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 SEMA3BQ13214 749 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 MSLNQ13421 630 aaPredicted RBP16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 EML3Q32P44 896 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 AAGABQ6PD74 315 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 FBXW8Q8N3Y1 598 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 ZMIZ2Q8NF64 920 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 SPATA22Q8NHS9 363 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 GDPD5Q8WTR4 605 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 MARK4Q96L34 752 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 GBA3Q9H227 469 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 SPATS2LQ9NUQ6 558 aaKnown RBP16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 FBXW11Q9UKB1 542 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 SSX2IPQ9Y2D8 614 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 JUNP05412 331 aaKnown RBP16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 CDK7P50613 346 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 POLE2P56282 527 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 DAOAP59103 153 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 TMEM198Q66K66 360 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 TWF2Q6IBS0 349 aaKnown RBP16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 ARHGAP36Q6ZRI8 547 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 PDSS2Q86YH6 399 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 KCTD13Q8WZ19 329 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 PCED1BQ96HM7 432 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 NR1H4Q96RI1 486 aaPredicted RBP16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 NUF2Q9BZD4 464 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 TCF7L2Q9NQB0 619 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 ADAM28Q9UKQ2 775 aa16.67■□□□□ 0.26
TM9SF1-201ENST00000261789 SMIM35A0A1B0GVV1 85 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 FESP07332 822 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 SBK3P0C264 359 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 MYL4P12829 197 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 ATXN3P54252 364 aaPredicted RBP16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 TRIP10Q15642 601 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 GSTA3Q16772 222 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 XKR4Q5GH76 650 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 ISLR2Q6UXK2 745 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 ACE2Q9BYF1 805 aaPredicted RBP16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 TKTL2Q9H0I9 626 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 ABHD16BQ9H3Z7 469 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 OXSMQ9NWU1 459 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 OR12D3Q9UGF7 316 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 ARHGAP26Q9UNA1 814 aa16.66■□□□□ 0.26
TM9SF1-201ENST00000261789 MT-CYBP00156 380 aaPredicted RBP16.65■□□□□ 0.26
TM9SF1-201ENST00000261789 SRGAP2BP0DMP2 458 aa16.65■□□□□ 0.26
TM9SF1-201ENST00000261789 GRIA4P48058 902 aa16.65■□□□□ 0.26
TM9SF1-201ENST00000261789 NUDT2P50583 147 aa16.65■□□□□ 0.26
TM9SF1-201ENST00000261789 NAGLUP54802 743 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms