RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 SPON2Q9BUD6 331 aa8.74□□□□□ -1.01
TMEM258-201ENST00000257262 NUP85Q9BW27 656 aa8.74□□□□□ -1.01
TMEM258-201ENST00000257262 PACSIN1Q9BY11 444 aa8.74□□□□□ -1.01
TMEM258-201ENST00000257262 SPTLC3Q9NUV7 552 aa8.74□□□□□ -1.01
TMEM258-201ENST00000257262 TMEM248Q9NWD8 314 aa8.74□□□□□ -1.01
TMEM258-201ENST00000257262 GPATCH2LQ9NWQ4 482 aa8.74□□□□□ -1.01
TMEM258-201ENST00000257262 MBD1Q9UIS9 605 aaPredicted RBP8.74□□□□□ -1.01
TMEM258-201ENST00000257262 SLC25A13Q9UJS0 675 aa8.74□□□□□ -1.01
TMEM258-201ENST00000257262 CYP8B1Q9UNU6 501 aa8.74□□□□□ -1.01
TMEM258-201ENST00000257262 AP4E1Q9UPM8 1137 aa8.74□□□□□ -1.01
TMEM258-201ENST00000257262 DMDP11532 3685 aa8.74□□□□□ -1.01
TMEM258-201ENST00000257262 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 IGHV1OR15-9A0A0B4J2B8 117 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 ILVBLA1L0T0 632 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 TARSL2A2RTX5 802 aaKnown RBP8.73□□□□□ -1.01
TMEM258-201ENST00000257262 PRPSAP2O60256 369 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 SNAP91O60641 907 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 SIN3BO75182 1162 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 ZNF217O75362 1048 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 MT-CO1P00395 513 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 RETP07949 1114 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 H2AFZP0C0S5 128 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 TMEM253P0C7T8 217 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 ACADMP11310 421 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 TCF4P15884 667 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 GLDCP23378 1020 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 EPHB2P29323 1055 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 RPS14P62263 151 aaKnown RBP8.73□□□□□ -1.01
TMEM258-201ENST00000257262 GNA12Q03113 381 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 SEMA3BQ13214 749 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 PIGHQ14442 188 aaPredicted RBP8.73□□□□□ -1.01
TMEM258-201ENST00000257262 DLG2Q15700 870 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 ACCSLQ4AC99 568 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 C9orf64Q5T6V5 341 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 ZNF783Q6ZMS7 281 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 CYP4V2Q6ZWL3 525 aaPredicted RBP8.73□□□□□ -1.01
TMEM258-201ENST00000257262 H2AFVQ71UI9 128 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 CACUL1Q86Y37 369 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 TMEFF1Q8IYR6 380 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 SH2D3CQ8N5H7 860 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 DEFB119Q8N690 84 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 FRS2Q8WU20 508 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 CTNNBL1Q8WYA6 563 aaPredicted RBP8.73□□□□□ -1.01
TMEM258-201ENST00000257262 ARHGEF2Q92974 986 aaKnown RBP8.73□□□□□ -1.01
TMEM258-201ENST00000257262 SPACA7Q96KW9 195 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 FAM129BQ96TA1 746 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 NCAPGQ9BPX3 1015 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 SNRNP25Q9BV90 132 aaKnown RBP8.73□□□□□ -1.01
TMEM258-201ENST00000257262 C2orf49Q9BVC5 232 aaPredicted RBP8.73□□□□□ -1.01
TMEM258-201ENST00000257262 ARRDC1-AS1Q9H2J1 176 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 DHX35Q9H5Z1 703 aaKnown RBP8.73□□□□□ -1.01
TMEM258-201ENST00000257262 RETREG1Q9H6L5 497 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 CTTNBP2NLQ9P2B4 639 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 IP6K2Q9UHH9 426 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 VPS51Q9UID3 782 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 ANAPC7Q9UJX3 599 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 GMEB2Q9UKD1 530 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 USP18Q9UMW8 372 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 THADAQ6YHU6 1953 aa8.73□□□□□ -1.01
TMEM258-201ENST00000257262 TNRC6BQ9UPQ9 1833 aaKnown RBP8.73□□□□□ -1.01
TMEM258-201ENST00000257262 VPS13AQ96RL7 3174 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 EDDM13A0A1B0GTR0 161 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 WASH4PA8MWX3 477 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 K7ERQ8 282 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 MYO1FO00160 1098 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 CBX4O00257 560 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 EEF2KO00418 725 aaKnown RBP8.72□□□□□ -1.01
TMEM258-201ENST00000257262 SMAD6O43541 496 aaKnown RBP8.72□□□□□ -1.01
TMEM258-201ENST00000257262 ATP9BO43861 1147 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 EPN2O95208 641 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 DNTTP04053 509 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 SRCP12931 536 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 VAV1P15498 845 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 IL1R2P27930 398 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 PCK1P35558 622 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 ACVRL1P37023 503 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 MAPKAPK2P49137 400 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 DHPSP49366 369 aaPredicted RBP8.72□□□□□ -1.01
TMEM258-201ENST00000257262 TPMTP51580 245 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 SPEM2Q0P670 501 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 POLD3Q15054 466 aaPredicted RBP8.72□□□□□ -1.01
TMEM258-201ENST00000257262 ELF2Q15723 593 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 KCNT1Q5JUK3 1230 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 PMS2CLQ68D20 193 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 IL31Q6EBC2 164 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 TXNRD3NBQ6F5E7 133 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 LINGO4Q6UY18 593 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 C11orf74Q86VG3 221 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 NIPA2Q8N8Q9 360 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 RTL3Q8N8U3 475 aaKnown RBP8.72□□□□□ -1.01
TMEM258-201ENST00000257262 DCAF4L2Q8NA75 395 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 ATP11CQ8NB49 1132 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 ZNF564Q8TBZ8 553 aaPredicted RBP8.72□□□□□ -1.01
TMEM258-201ENST00000257262 LOXL4Q96JB6 756 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 KCTD15Q96SI1 283 aaPredicted RBP8.72□□□□□ -1.01
TMEM258-201ENST00000257262 PRR14Q9BWN1 585 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 ACE2Q9BYF1 805 aaPredicted RBP8.72□□□□□ -1.01
TMEM258-201ENST00000257262 RSPH9Q9H1X1 276 aaPredicted RBP8.72□□□□□ -1.01
TMEM258-201ENST00000257262 MAGEH1Q9H213 219 aa8.72□□□□□ -1.01
TMEM258-201ENST00000257262 CATSPERBQ9H7T0 1116 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms