RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 ALOX15BO15296 676 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 EIF3HO15372 352 aaKnown RBP eCLIP9.66□□□□□ -0.86
NIP7-202ENST00000254941 ZBTB24O43167 697 aaPredicted RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 TTC4O95801 387 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 PEX11BO96011 259 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 JCHAINP01591 159 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 NUDT17P0C025 328 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 PSMB4P28070 264 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 CD68P34810 354 aaPredicted RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 MAGEA4P43358 317 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 ARL4CP56559 192 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 NTHL1P78549 312 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 SERINC3Q13530 473 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 HNRNPDQ14103 355 aaKnown RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 SLC29A2Q14542 456 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 ANO4Q32M45 955 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 FNBP1LQ5T0N5 605 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 C6orf118Q5T5N4 469 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 ITPRIPL1Q6GPH6 555 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 CNTD1Q8N815 330 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 SMG7Q92540 1137 aaKnown RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 PPP2R3CQ969Q6 453 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 ZNF419Q96HQ0 510 aaPredicted RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 AGAP3Q96P47 875 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 MAGEH1Q9H213 219 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 GBA3Q9H227 469 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 SFXN1Q9H9B4 322 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 EIF2B3Q9NR50 452 aaKnown RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 PLAAQ9Y263 795 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 NFS1Q9Y697 457 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 ILVBLA1L0T0 632 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 E7EVH7 732 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 RFXAPO00287 272 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 SCAMP3O14828 347 aaKnown RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 CACNG3O60359 315 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 TSPAN3O60637 253 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 MAGEA3P43357 314 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 RENBPP51606 427 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 GNA12Q03113 381 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 IL10RBQ08334 325 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 PDIA2Q13087 525 aaKnown RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 GPS2Q13227 327 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 ZNF177Q13360 481 aaPredicted RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 KYNUQ16719 465 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 MSS51Q4VC12 460 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 SYCP2LQ5T4T6 812 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 DENND2CQ68D51 928 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 LRIG3Q6UXM1 1119 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 TMC5Q6UXY8 1006 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 TMEM184AQ6ZMB5 413 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 BBS7Q8IWZ6 715 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 KLHDC8BQ8IXV7 354 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 HJURPQ8NCD3 748 aaPredicted RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 OR52K2Q8NGK3 314 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 SH3RF2Q8TEC5 729 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 ARHGEF2Q92974 986 aaKnown RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 USP13Q92995 863 aaPredicted RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 TMA16Q96EY4 203 aaKnown RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 SERPINB12Q96P63 405 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 GORASP1Q9BQQ3 440 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 SMG9Q9H0W8 520 aaKnown RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 PIDD1Q9HB75 910 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 SAYSD1Q9NPB0 183 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 TDP1Q9NUW8 608 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 DZANK1Q9NVP4 752 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 CCL26Q9Y258 94 aa9.66□□□□□ -0.86
NIP7-202ENST00000254941 MRPS23Q9Y3D9 190 aaKnown RBP9.66□□□□□ -0.86
NIP7-202ENST00000254941 BRWD1Q9NSI6 2320 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 A0A0D9SEW6 157 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 TYW5A2RUC4 315 aaKnown RBP9.65□□□□□ -0.86
NIP7-202ENST00000254941 ERI2A8K979 691 aaKnown RBP9.65□□□□□ -0.86
NIP7-202ENST00000254941 J3KR12 359 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 PRAMEF11O60813 436 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 TCF3P15923 654 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 CEBPBP17676 345 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 NFKB1P19838 968 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 ACVRL1P37023 503 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 IFNAR2P48551 515 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 EIF3BP55884 814 aaKnown RBP9.65□□□□□ -0.86
NIP7-202ENST00000254941 SARNPP82979 210 aaKnown RBP9.65□□□□□ -0.86
NIP7-202ENST00000254941 TNK2Q07912 1038 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 FASTKD3Q14CZ7 662 aaKnown RBP9.65□□□□□ -0.86
NIP7-202ENST00000254941 MPP7Q5T2T1 576 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 UBAP2Q5T6F2 1119 aaKnown RBP9.65□□□□□ -0.86
NIP7-202ENST00000254941 KCTD11Q693B1 232 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 CXorf57Q6NSI4 855 aaKnown RBP9.65□□□□□ -0.86
NIP7-202ENST00000254941 ZNF783Q6ZMS7 281 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 ZNF534Q76KX8 674 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 CAND1Q86VP6 1230 aaKnown RBP9.65□□□□□ -0.86
NIP7-202ENST00000254941 ZBED8Q8IZ13 594 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 C12orf76Q8N812 135 aaPredicted RBP9.65□□□□□ -0.86
NIP7-202ENST00000254941 PDCD7Q8N8D1 485 aaKnown RBP9.65□□□□□ -0.86
NIP7-202ENST00000254941 C9orf72Q96LT7 481 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 ZSWIM3Q96MP5 696 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 TTC25Q96NG3 672 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 RUFY1Q96T51 708 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 SH3GL2Q99962 352 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 PRO3102Q9H379 93 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 SP110Q9HB58 689 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms