RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 BRMS1LQ5PSV4 323 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 AGBL4Q5VU57 503 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 SFMBT2Q5VUG0 894 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 TBC1D3GQ6DHY5 549 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 OR6B2Q6IFH4 312 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 TBC1D3CQ6IPX1 549 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 BNIPLQ7Z465 357 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 IQCHQ86VS3 1027 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 TRIM69Q86WT6 500 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 SPATS2Q86XZ4 545 aaKnown RBP13.39□□□□□ -0.27
MRPL35-201ENST00000254644 MARCH9Q86YJ5 346 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 GATAD2AQ86YP4 633 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 TBC1D3Q8IZP1 549 aaPredicted RBP13.39□□□□□ -0.27
MRPL35-201ENST00000254644 OR8D1Q8WZ84 308 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 TSC1Q92574 1164 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 SERAC1Q96JX3 654 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 NOX5Q96PH1 765 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 PSMB7Q99436 277 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 PIGVQ9NUD9 493 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 COX16Q9P0S2 106 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 FTSJ1Q9UET6 329 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 DMTF1Q9Y222 760 aa13.39□□□□□ -0.27
MRPL35-201ENST00000254644 IGLV3-10A0A075B6K4 115 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.38□□□□□ -0.27
MRPL35-201ENST00000254644 DRGXA6NNA5 263 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 E9PAM4 449 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 PLK4O00444 970 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 RTN2O75298 545 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 CNTN5O94779 1100 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 ADCY5O95622 1261 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 C1SP09871 688 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 PNMA6AP0CW24 399 aaPredicted RBP13.38□□□□□ -0.27
MRPL35-201ENST00000254644 SRCP12931 536 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 TFE3P19532 575 aaPredicted RBP13.38□□□□□ -0.27
MRPL35-201ENST00000254644 EPHA8P29322 1005 aaPredicted RBP13.38□□□□□ -0.27
MRPL35-201ENST00000254644 KRT9P35527 623 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 SCNN1AP37088 669 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 TAS2R38P59533 333 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 KCNMA1Q12791 1236 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 CNTN1Q12860 1018 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 OVGP1Q12889 678 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 NME3Q13232 169 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 ZNF177Q13360 481 aaPredicted RBP13.38□□□□□ -0.27
MRPL35-201ENST00000254644 ALFQ53S48 1182 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 FAM46CQ5VWP2 391 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 NAPEPLDQ6IQ20 393 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 DSG4Q86SJ6 1040 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 PRPF39Q86UA1 669 aaKnown RBP13.38□□□□□ -0.27
MRPL35-201ENST00000254644 TMPRSS12Q86WS5 348 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 CREBRFQ8IUR6 639 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 PIP4K2CQ8TBX8 421 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 RNF34Q969K3 372 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 C1orf74Q96LT6 269 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 NDST4Q9H3R1 872 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 SCUBE2Q9NQ36 999 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 GDF3Q9NR23 364 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 AASDHPPTQ9NRN7 309 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 TMEM51Q9NW97 253 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 ZNF212Q9UDV6 495 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 SLC25A13Q9UJS0 675 aa13.38□□□□□ -0.27
MRPL35-201ENST00000254644 GOLGA8CPA6NN73 597 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 ENC1O14682 589 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 LDOC1O95751 146 aaPredicted RBP13.37□□□□□ -0.27
MRPL35-201ENST00000254644 MT-CO1P00395 513 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 CTSLP07711 333 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 CDK4P11802 303 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 GGCXP38435 758 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 MTIF2P46199 727 aaKnown RBP13.37□□□□□ -0.27
MRPL35-201ENST00000254644 ARRB1P49407 418 aaPredicted RBP13.37□□□□□ -0.27
MRPL35-201ENST00000254644 BPIFB4P59827 614 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 BNIP3Q12983 259 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 ACCSLQ4AC99 568 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 VWA3BQ502W6 1294 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 PIP5KL1Q5T9C9 394 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 DHRS13Q6UX07 377 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 Q6ZVU0 165 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 SETD3Q86TU7 594 aaPredicted RBP13.37□□□□□ -0.27
MRPL35-201ENST00000254644 OXR1Q8N573 874 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 PDCD7Q8N8D1 485 aaKnown RBP13.37□□□□□ -0.27
MRPL35-201ENST00000254644 NAA15Q9BXJ9 866 aaKnown RBP13.37□□□□□ -0.27
MRPL35-201ENST00000254644 TKTL2Q9H0I9 626 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 WDCPQ9H6R7 721 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 PLCB1Q9NQ66 1216 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.37□□□□□ -0.27
MRPL35-201ENST00000254644 VPS28Q9UK41 221 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 PTPRQQ9UMZ3 2332 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 BPTFQ12830 3046 aa13.37□□□□□ -0.27
MRPL35-201ENST00000254644 FAM149AA5PLN7 773 aa13.36□□□□□ -0.27
MRPL35-201ENST00000254644 C1QTNF3-AMACRE9PGA6 284 aa13.36□□□□□ -0.27
MRPL35-201ENST00000254644 RNF103O00237 685 aa13.36□□□□□ -0.27
MRPL35-201ENST00000254644 CBX4O00257 560 aa13.36□□□□□ -0.27
MRPL35-201ENST00000254644 RNGTTO60942 597 aaKnown RBP13.36□□□□□ -0.27
MRPL35-201ENST00000254644 ZNF821O75541 412 aaPredicted RBP13.36□□□□□ -0.27
MRPL35-201ENST00000254644 F9P00740 461 aa13.36□□□□□ -0.27
MRPL35-201ENST00000254644 ITGAVP06756 1048 aa13.36□□□□□ -0.27
MRPL35-201ENST00000254644 PRKCSHP14314 528 aaPredicted RBP13.36□□□□□ -0.27
MRPL35-201ENST00000254644 CYP11B1P15538 503 aa13.36□□□□□ -0.27
MRPL35-201ENST00000254644 ERCC5P28715 1186 aaPredicted RBP13.36□□□□□ -0.27
MRPL35-201ENST00000254644 ACADVLP49748 655 aa13.36□□□□□ -0.27
MRPL35-201ENST00000254644 CYP4F3Q08477 520 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms