RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 DCLK2Q8N568 766 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 PPP1R14CQ8TAE6 165 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 ACMSDQ8TDX5 336 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 ZNF778Q96MU6 729 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 SNX15Q9NRS6 342 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 NDFIP2Q9NV92 336 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 KCNK4Q9NYG8 393 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 TMEM216Q9P0N5 145 aa19.08■□□□□ 0.64
PDLIM4-201ENST00000253754 ENPP3O14638 875 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 IRAK2O43187 625 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 FGF3P11487 239 aaPredicted RBP19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 NAB1Q13506 487 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 PCLAFQ15004 111 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 DLG2Q15700 870 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 CCDC91Q7Z6B0 441 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 CRLF3Q8IUI8 442 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 SPATA2LQ8IUW3 424 aaPredicted RBP19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 ACVR1CQ8NER5 493 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 CPNE1Q99829 537 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 EBF4Q9BQW3 602 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 CADM1Q9BY67 442 aaKnown RBP19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 PPP1R12CQ9BZL4 782 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 HIPK3Q9H422 1215 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 TRHDEQ9UKU6 1024 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 DSEQ9UL01 958 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 SHROOM3Q8TF72 1996 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 PAGE1O75459 146 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 DDHD2O94830 711 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 MOCS2O96007 188 aaPredicted RBP19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 CPA2P48052 419 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 TSPY1Q01534 308 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 EIF4EBP2Q13542 120 aaPredicted RBP19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 NOMO2Q5JPE7 1267 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 ITPRIPL1Q6GPH6 555 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 RFWD3Q6PCD5 774 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 RINLQ6ZS11 566 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 SCD5Q86SK9 330 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 C10orf107Q8IVU9 208 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 ARHGAP12Q8IWW6 846 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 THEM5Q8N1Q8 247 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 DIS3LQ8TF46 1054 aaKnown RBP19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 NSL1Q96IY1 281 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 SUSD3Q96L08 255 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 RBBP8Q99708 897 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 CRISPLD2Q9H0B8 497 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 BRD8Q9H0E9 1235 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 NMUR1Q9HB89 426 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 ARHGEF38Q9NXL2 777 aa19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 NKX1-2Q9UD57 310 aaPredicted RBP19.07■□□□□ 0.64
PDLIM4-201ENST00000253754 COL4A4P53420 1690 aaPredicted RBP19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 TNFRSF10BO14763 440 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 INPPL1O15357 1258 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 MTSS1O43312 755 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 USP1O94782 785 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 MT-CYBP00156 380 aaPredicted RBP19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 EZRP15311 586 aaKnown RBP19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 NMBRP28336 390 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 PGGT1BP53609 377 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 TLE2Q04725 743 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 TRIM60Q495X7 471 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 SLC39A12Q504Y0 691 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 TEDDM1Q5T9Z0 273 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 BTBD8Q5XKL5 378 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 FSTL4Q6MZW2 842 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 ANKRD33Q7Z3H0 272 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 SCN4BQ8IWT1 228 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 PLD6Q8N2A8 252 aaKnown RBP19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 SEPT8Q92599 483 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 ZNF333Q96JL9 665 aa19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 PPARGC1AQ9UBK2 798 aaKnown RBP19.06■□□□□ 0.64
PDLIM4-201ENST00000253754 ANP32DO95626 131 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 PROCP04070 461 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 CCND1P24385 295 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 ARRB2P32121 409 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 GPR15P49685 360 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 IRF9Q00978 393 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 YWHAHQ04917 246 aaPredicted RBP19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 PPP2R5DQ14738 602 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 ARTNQ5T4W7 220 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 GRTP1Q5TC63 336 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 FBXO46Q6PJ61 603 aaPredicted RBP19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 TREML1Q86YW5 311 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 TNS4Q8IZW8 715 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 RAB3IL1Q8TBN0 382 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 URGCPQ8TCY9 931 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 ATP2A3Q93084 1043 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 UROC1Q96N76 676 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 OSBPL2Q9H1P3 480 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 TLE6Q9H808 572 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 C20orf96Q9NUD7 363 aaPredicted RBP19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 THAP1Q9NVV9 213 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 OSER1Q9NX31 292 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 TMEM161AQ9NX61 479 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 ABI2Q9NYB9 513 aaPredicted RBP19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 TCTN1Q2MV58 587 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 KCNMB4Q86W47 210 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 TTC8Q8TAM2 541 aa19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 FCRL2Q96LA5 508 aaPredicted RBP19.05■□□□□ 0.64
PDLIM4-201ENST00000253754 DENND2DQ9H6A0 471 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms