RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PCDHB4Q9Y5E5 795 aa13.25□□□□□ -0.29
MSH2-201ENST00000233146 ISPDA4D126 451 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 EIF3DO15371 548 aaKnown RBP eCLIP13.24□□□□□ -0.292e-6■■■□□ 16.1
MSH2-201ENST00000233146 GSNP06396 782 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 ENO3P13929 434 aaPredicted RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 MX2P20592 715 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 TBXAS1P24557 533 aaPredicted RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 ARRB2P32121 409 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 GRIK1P39086 918 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 GABRB2P47870 512 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 ILF2Q12905 390 aaKnown RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 EPC2Q52LR7 807 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 CEP55Q53EZ4 464 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 XAF1Q6GPH4 301 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 TATDN1Q6P1N9 297 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 CYP20A1Q6UW02 462 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 IFNL2Q8IZJ0 200 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 FBXL6Q8N531 539 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 NPLOC4Q8TAT6 608 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 AFG1LQ8WV93 481 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 METTL2AQ96IZ6 378 aaKnown RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 DCAF5Q96JK2 942 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 CD320Q9NPF0 282 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.24□□□□□ -0.29
MSH2-201ENST00000233146 ATPIF1Q9UII2 106 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 ZNF221Q9UK13 617 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 PCDHGC3Q9UN70 934 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 CFL2Q9Y281 166 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 SERPINE1P05121 402 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 HSPA1LP34931 641 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 AP2S1P53680 142 aaPredicted RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 RPL10AP62906 217 aaKnown RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 GPLD1P80108 840 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 BST2Q10589 180 aaKnown RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 TAF5Q15542 800 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 MCOLN2Q8IZK6 566 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 CADM2Q8N3J6 435 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 AFAP1L2Q8N4X5 818 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 OR6F1Q8NGZ6 308 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 KREMEN1Q96MU8 473 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 ACO2Q99798 780 aaKnown RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 CHID1Q9BWS9 393 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 TRIM39Q9HCM9 518 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 XPO7Q9UIA9 1087 aaKnown RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 TRPC5Q9UL62 973 aaPredicted RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 VANGL2Q9ULK5 521 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 CNOT6Q9ULM6 557 aaKnown RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 TEX264Q9Y6I9 313 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 TCRBV3S1A0A5B6 114 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 A8MX80 341 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 UGT2B11O75310 529 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 FOSL1P15407 271 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 TCN1P20061 433 aaPredicted RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 CD40LGP29965 261 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 CYP2J2P51589 502 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 TRIM25Q14258 630 aaKnown RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 SBK1Q52WX2 424 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 STXBP5Q5T5C0 1151 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 INTS11Q5TA45 600 aaKnown RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 FAXCQ5TGI0 409 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 PXDC1Q5TGL8 231 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 UTS2BQ765I0 119 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 CAMK1DQ8IU85 385 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 RCOR2Q8IZ40 523 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 SCML4Q8N228 414 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 TOP1MTQ969P6 601 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 NRBF2Q96F24 287 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 SLC39A13Q96H72 371 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 SLITRK1Q96PX8 696 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 DEPDC7Q96QD5 511 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 PIGSQ96S52 555 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 COMMD8Q9NX08 183 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 ADPRHL2Q9NX46 363 aa13.24□□□□□ -0.29
MSH2-201ENST00000233146 CAB39Q9Y376 341 aaPredicted RBP13.24□□□□□ -0.29
MSH2-201ENST00000233146 CXorf49A8MYA2 514 aaPredicted RBP13.23□□□□□ -0.29
MSH2-201ENST00000233146 PI4K2BG5E9Z4 385 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 TOR1BO14657 336 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 SNX2O60749 519 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 TOP3BO95985 862 aaKnown RBP13.23□□□□□ -0.29
MSH2-201ENST00000233146 HARS2P49590 506 aaKnown RBP13.23□□□□□ -0.29
MSH2-201ENST00000233146 BMPR2Q13873 1038 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 ANO4Q32M45 955 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 SLC9B1Q4ZJI4 515 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 SLC16A12Q6ZSM3 486 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 SLCO6A1Q86UG4 719 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 SHC3Q92529 594 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 PDZD7Q9H5P4 517 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 COG4Q9H9E3 785 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 HOMER2Q9NSB8 354 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 C20orf96Q9NUD7 363 aaPredicted RBP13.23□□□□□ -0.29
MSH2-201ENST00000233146 ZNF335Q9H4Z2 1342 aaPredicted RBP13.23□□□□□ -0.29
MSH2-201ENST00000233146 SRCAPQ6ZRS2 3230 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 B3GALNT1O75752 331 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 CLIC3O95833 236 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 ADRA2BP18089 450 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 ADCY7P51828 1080 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 PLA2G16P53816 162 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 MRPS15P82914 257 aaKnown RBP13.23□□□□□ -0.29
MSH2-201ENST00000233146 NAB1Q13506 487 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 SLC12A1Q13621 1099 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms