RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 TRPM7Q96QT4 1865 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 G3V2L1 256 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 GPR182O15218 404 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 TRIM13O60858 407 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 DUSP11O75319 330 aaKnown RBP22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 TBX10O75333 385 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 JCHAINP01591 159 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 SKIP12755 728 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 CPOXP36551 454 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 CSRP3P50461 194 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 RAB27AP51159 221 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 RABGGTBP53611 331 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 OLIG2Q13516 323 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 ANO4Q32M45 955 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 TIGD5Q53EQ6 642 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 BRMS1LQ5PSV4 323 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 ARMC3Q5W041 872 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 MAVSQ7Z434 540 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 APLFQ8IW19 511 aaPredicted RBP22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 LZTR1Q8N653 840 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 C3orf58Q8NDZ4 430 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 EDEM1Q92611 657 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 HAPLN3Q96S86 360 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 CDH19Q9H159 772 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 ARHGEF38Q9NXL2 777 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 IL1RAPL1Q9NZN1 696 aa22.4■■□□□ 1.18
SMARCD2-201ENST00000225742 FNDC1Q4ZHG4 1894 aaPredicted RBP22.39■■□□□ 1.18
SMARCD2-201ENST00000225742 ATP9BO43861 1147 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 FKBP6O75344 327 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 IGLV3-25P01717 112 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 C2P06681 752 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 ABL2P42684 1182 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 COPAP53621 1224 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 MRPS35P82673 323 aaKnown RBP22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 MAPRE1Q15691 268 aaKnown RBP22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 AAGABQ6PD74 315 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 AGMOQ6ZNB7 445 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 RIPOR1Q6ZS17 1223 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 UPF1Q92900 1129 aaKnown RBP eCLIP22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 MFSD3Q96ES6 412 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 AGAP2Q99490 1192 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 GPR22Q99680 433 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 RTP3Q9BQQ7 232 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 NMRAL1Q9HBL8 299 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 LRCH1Q9Y2L9 728 aa22.39■■□□□ 1.17
SMARCD2-201ENST00000225742 ARHGEF37A1IGU5 675 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 FGF10O15520 208 aaPredicted RBP22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 ZNF623O75123 536 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 SMNDC1O75940 238 aaKnown RBP eCLIP22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 ANXA9O76027 345 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 CELF2O95319 508 aaKnown RBP22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 HSPA4LO95757 839 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 COL6A2P12110 1019 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 SCNN1GP51170 649 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 AP2B1P63010 937 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 UGP2Q16851 508 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 TMCO4Q5TGY1 634 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 EPGNQ6UW88 154 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 PLD6Q8N2A8 252 aaKnown RBP22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 DQX1Q8TE96 717 aaKnown RBP22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 RNF34Q969K3 372 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 VPS39Q96JC1 886 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 TSNARE1Q96NA8 513 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 FCRL5Q96RD9 977 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 RHOJQ9H4E5 214 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 IARS2Q9NSE4 1012 aaKnown RBP22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 CACNG4Q9UBN1 327 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 SLC7A8Q9UHI5 535 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 MAP3K7O43318 606 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 HOXC13P31276 330 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 SESN3P58005 492 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 EIF4EBP2Q13542 120 aaPredicted RBP22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 PCID2Q5JVF3 399 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 TRIM68Q6AZZ1 485 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 PLCD3Q8N3E9 789 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 PTCD2Q8WV60 388 aaKnown RBP22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 NRG4Q8WWG1 115 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 LPPQ93052 612 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 PANX3Q96QZ0 392 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 CHRAC1Q9NRG0 131 aa22.38■■□□□ 1.17
SMARCD2-201ENST00000225742 A6NHS1 94 aa22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 ARRB2P32121 409 aa22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 CFAP157Q5JU67 520 aa22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 ANO7Q6IWH7 933 aa22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 IRGCQ6NXR0 463 aa22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 ADGRG6Q86SQ4 1221 aa22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 SCG3Q8WXD2 468 aaKnown RBP22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 PKMYT1Q99640 499 aa22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 CATSPERBQ9H7T0 1116 aa22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 MRM3Q9HC36 420 aaKnown RBP22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 ZNF358Q9NW07 568 aa22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 TLK1Q9UKI8 766 aa22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 SNX10Q9Y5X0 201 aa22.37■■□□□ 1.17
SMARCD2-201ENST00000225742 PATJQ8NI35 1801 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 A0A088AWK7 358 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 CASTOR2A6NHX0 329 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 CCNT2O60583 730 aaKnown RBP22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 NMBRP28336 390 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 MGAT3Q09327 533 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 TAF1CQ15572 869 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms