RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 CTSOP43234 321 aaPredicted RBP18.52■□□□□ 0.56
PFN1-201ENST00000225655 FAM193AP78312 1265 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 ECT2LQ008S8 904 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 BNC1Q01954 994 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 SFSWAPQ12872 951 aaKnown RBP18.52■□□□□ 0.56
PFN1-201ENST00000225655 C2CD6Q53TS8 623 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 UNQ6494/PRO21346Q6UXR6 183 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 NAXDQ8IW45 347 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 APCDD1Q8J025 514 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 BIRC7Q96CA5 298 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 METTL5Q9NRN9 209 aaKnown RBP18.52■□□□□ 0.56
PFN1-201ENST00000225655 CNOT8Q9UFF9 292 aaKnown RBP18.52■□□□□ 0.56
PFN1-201ENST00000225655 NCKAP1Q9Y2A7 1128 aa18.52■□□□□ 0.56
PFN1-201ENST00000225655 EDDM13A0A1B0GTR0 161 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 A0A1B0GVM2 712 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 TCAF2A6NFQ2 919 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 TTC34A8MYJ7 566 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 C1QTNF9BB2RNN3 333 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 TRIM16O95361 564 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 H2AFZP0C0S5 128 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 C1QTNF9P0C862 333 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 RRM1P23921 792 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 CD27P26842 260 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 NOS2P35228 1153 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 OXCT1P55809 520 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 PTP4A2Q12974 167 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 CST6Q15828 149 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 ASTE1Q2TB18 679 aaPredicted RBP18.51■□□□□ 0.55
PFN1-201ENST00000225655 HLA-BQ31612 363 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 RABGAP1LQ5R372 815 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 RNF219Q5W0B1 726 aaPredicted RBP18.51■□□□□ 0.55
PFN1-201ENST00000225655 H2AFVQ71UI9 128 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 SND1Q7KZF4 910 aaKnown RBP eCLIP18.51■□□□□ 0.55
PFN1-201ENST00000225655 CCAR2Q8N163 923 aaKnown RBP18.51■□□□□ 0.55
PFN1-201ENST00000225655 RNF34Q969K3 372 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 CAMK1GQ96NX5 476 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 TMEM121BQ9BXQ6 578 aaPredicted RBP18.51■□□□□ 0.55
PFN1-201ENST00000225655 GAREM1Q9H706 876 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 SPTLC3Q9NUV7 552 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 FBXL12Q9NXK8 326 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 NEUROG3Q9Y4Z2 214 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 PAXBP1Q9Y5B6 917 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 SLCO1B1Q9Y6L6 691 aa18.51■□□□□ 0.55
PFN1-201ENST00000225655 SYNJ2BP-COX16A0A087WUM0 186 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 A0A1B0GVT2 93 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 SIGLEC16A6NMB1 481 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 HYAL3O43820 417 aaPredicted RBP18.5■□□□□ 0.55
PFN1-201ENST00000225655 SDC4P31431 198 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 RDXP35241 583 aaKnown RBP18.5■□□□□ 0.55
PFN1-201ENST00000225655 CSNK1EP49674 416 aaKnown RBP18.5■□□□□ 0.55
PFN1-201ENST00000225655 PLK1P53350 603 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 SULT2A1Q06520 285 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 TEAD4Q15561 434 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 TRIP6Q15654 476 aaKnown RBP18.5■□□□□ 0.55
PFN1-201ENST00000225655 ZNF423Q2M1K9 1284 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 FBXL22Q6P050 247 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 PHLDB2Q86SQ0 1253 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 FAM129BQ96TA1 746 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 IL21RQ9HBE5 538 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 TM9SF3Q9HD45 589 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 COX16Q9P0S2 106 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 MYO1AQ9UBC5 1043 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 SLCO3A1Q9UIG8 710 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 PCDHB9Q9Y5E1 797 aa18.5■□□□□ 0.55
PFN1-201ENST00000225655 SOWAHDA6NJG2 315 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 EIF3CLB5ME19 914 aaKnown RBP18.49■□□□□ 0.55
PFN1-201ENST00000225655 MID1O15344 667 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 FSBPO95073 299 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 F9P00740 461 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 PDGFRAP16234 1089 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 NNMTP40261 264 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 GRIA4P48058 902 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 KRT83P78385 493 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 NME3Q13232 169 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 AUHQ13825 339 aaKnown RBP18.49■□□□□ 0.55
PFN1-201ENST00000225655 KIAA0895LQ68EN5 471 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 PLEKHA7Q6IQ23 1121 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 CXorf57Q6NSI4 855 aaKnown RBP18.49■□□□□ 0.55
PFN1-201ENST00000225655 CIR1Q86X95 450 aaPredicted RBP18.49■□□□□ 0.55
PFN1-201ENST00000225655 MMAAQ8IVH4 418 aaKnown RBP18.49■□□□□ 0.55
PFN1-201ENST00000225655 GANCQ8TET4 914 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 GATA6Q92908 595 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 RPL10LQ96L21 214 aaKnown RBP18.49■□□□□ 0.55
PFN1-201ENST00000225655 MCEEQ96PE7 176 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 PPP1R9BQ96SB3 815 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 EIF3CQ99613 913 aaKnown RBP18.49■□□□□ 0.55
PFN1-201ENST00000225655 ORAI3Q9BRQ5 295 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 TM7SF3Q9NS93 570 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 SERGEFQ9UGK8 458 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 LCMT1Q9UIC8 334 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 TMEM59LQ9UK28 342 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 INTUQ9ULD6 942 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 FZD4Q9ULV1 537 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 FNDC3AQ9Y2H6 1198 aaKnown RBP18.49■□□□□ 0.55
PFN1-201ENST00000225655 PCDHGB2Q9Y5G2 931 aa18.49■□□□□ 0.55
PFN1-201ENST00000225655 KNL1Q8NG31 2342 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 TMEM8BA6NDV4 472 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 CBFA2T3O75081 653 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 NDUFA10O95299 355 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 IGHV4-34P06331 123 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms