RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 SLC22A17Q8WUG5 538 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 WBP2Q969T9 261 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 GCNAQ96QF7 691 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 EBNA1BP2Q99848 306 aaKnown RBP17.15■□□□□ 0.34
TVP23C-201ENST00000225576 ACSS3Q9H6R3 686 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 ASAH2Q9NR71 780 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 RBM22Q9NW64 420 aaKnown RBP eCLIP17.15■□□□□ 0.34
TVP23C-201ENST00000225576 SMPD4Q9NXE4 827 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 PCDHA11Q9Y5I1 949 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 SDR42E2A6NKP2 422 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 H3BNC9 293 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 CCL16O15467 120 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 GREM1O60565 184 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 CA3P07451 260 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 IRF1P10914 325 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 ATP5DP30049 168 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 IRS1P35568 1242 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 MAGOHP61326 146 aaKnown RBP17.14■□□□□ 0.33
TVP23C-201ENST00000225576 SKOR1P84550 965 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 CYP4F8P98187 520 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 TNK2Q07912 1038 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 IL10RBQ08334 325 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 SERINC3Q13530 473 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 SHHQ15465 462 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 TTC39BQ5VTQ0 682 aaPredicted RBP17.14■□□□□ 0.33
TVP23C-201ENST00000225576 FAM109BQ6ICB4 259 aaPredicted RBP17.14■□□□□ 0.33
TVP23C-201ENST00000225576 KDM7AQ6ZMT4 941 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 CAPN12Q6ZSI9 719 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 CCNJLQ8IV13 435 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 CFAP52Q8N1V2 620 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 ARFGAP2Q8N6H7 521 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 USP33Q8TEY7 942 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 PRICKLE1Q96MT3 831 aaPredicted RBP17.14■□□□□ 0.33
TVP23C-201ENST00000225576 CORO1BQ9BR76 489 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 MLPHQ9BV36 600 aaPredicted RBP17.14■□□□□ 0.33
TVP23C-201ENST00000225576 MAGEH1Q9H213 219 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 ATXN3LQ9H3M9 355 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 GLOD4Q9HC38 313 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 EURLQ9NYK6 297 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 ZC3H7BQ9UGR2 993 aaKnown RBP17.14■□□□□ 0.33
TVP23C-201ENST00000225576 SLC24A2Q9UI40 661 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 AAR2Q9Y312 384 aaKnown RBP17.14■□□□□ 0.33
TVP23C-201ENST00000225576 CPQQ9Y646 472 aa17.14■□□□□ 0.33
TVP23C-201ENST00000225576 TRAV19A0A0A6YYK7 116 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 AP3B1O00203 1094 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 TRDMT1O14717 391 aaKnown RBP17.13■□□□□ 0.33
TVP23C-201ENST00000225576 CLASP2O75122 1294 aaKnown RBP17.13■□□□□ 0.33
TVP23C-201ENST00000225576 ANXA9O76027 345 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 CSPG5O95196 566 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 CPP00450 1065 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 HNRNPA1P09651 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
TVP23C-201ENST00000225576 PTPN2P17706 415 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 MAGEA10P43363 369 aaPredicted RBP17.13■□□□□ 0.33
TVP23C-201ENST00000225576 RPS24P62847 133 aaKnown RBP17.13■□□□□ 0.33
TVP23C-201ENST00000225576 KLHL38Q2WGJ6 581 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 PRPF38BQ5VTL8 546 aaKnown RBP17.13■□□□□ 0.33
TVP23C-201ENST00000225576 Q6ZNB5 142 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 SETD3Q86TU7 594 aaPredicted RBP17.13■□□□□ 0.33
TVP23C-201ENST00000225576 TEX26Q8N6G2 289 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 MAB21L3Q8N8X9 362 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 FBF1Q8TES7 1133 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 NSMCE1Q8WV22 266 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 LRRC40Q9H9A6 602 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 SP110Q9HB58 689 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 MAN1C1Q9NR34 630 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 ZNF510Q9Y2H8 683 aa17.13■□□□□ 0.33
TVP23C-201ENST00000225576 NUP205Q92621 2012 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 A0A1B0GVM2 712 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 A0A1W2PRU2 124 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 TCAF2A6NFQ2 919 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 J3KR12 359 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 NEBLO76041 1014 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 HLA-DQB2P05538 268 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 MYL4P12829 197 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 GCAP28676 217 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 STX2P32856 288 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 GEMIN4P57678 1058 aaKnown RBP17.12■□□□□ 0.33
TVP23C-201ENST00000225576 ZXDBP98169 803 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 GNA12Q03113 381 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 GPM6BQ13491 265 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 MARC1Q5VT66 337 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 CYS1Q717R9 158 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 OTOP3Q7RTS5 596 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 LINC00523Q86TU6 105 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 FAM217AQ8IXS0 508 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 LEMD2Q8NC56 503 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 ARHGEF2Q92974 986 aaKnown RBP17.12■□□□□ 0.33
TVP23C-201ENST00000225576 OXNAD1Q96HP4 312 aaPredicted RBP17.12■□□□□ 0.33
TVP23C-201ENST00000225576 ZNF419Q96HQ0 510 aaPredicted RBP17.12■□□□□ 0.33
TVP23C-201ENST00000225576 XPO6Q96QU8 1125 aaKnown RBP17.12■□□□□ 0.33
TVP23C-201ENST00000225576 CYTH2Q99418 400 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 NAT9Q9BTE0 207 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 CASS4Q9NQ75 786 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 PSD3Q9NYI0 1048 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 DPP7Q9UHL4 492 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 TBC1D30Q9Y2I9 924 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 DOCK4Q8N1I0 1966 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 ANAPC1Q9H1A4 1944 aa17.12■□□□□ 0.33
TVP23C-201ENST00000225576 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.11■□□□□ 0.33
TVP23C-201ENST00000225576 TCRBV9S1A1TA0A576 114 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms