RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TKTL2Q9H0I9 626 aa15.41■□□□□ 0.06
UPK3A-201ENST00000216211 PDCL3Q9H2J4 239 aa15.41■□□□□ 0.06
UPK3A-201ENST00000216211 ARHGEF38Q9NXL2 777 aa15.41■□□□□ 0.06
UPK3A-201ENST00000216211 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.41■□□□□ 0.06
UPK3A-201ENST00000216211 VPS28Q9UK41 221 aa15.41■□□□□ 0.06
UPK3A-201ENST00000216211 OR51B4Q9Y5P0 310 aa15.41■□□□□ 0.06
UPK3A-201ENST00000216211 SNX10Q9Y5X0 201 aa15.41■□□□□ 0.06
UPK3A-201ENST00000216211 FHOD1Q9Y613 1164 aa15.41■□□□□ 0.06
UPK3A-201ENST00000216211 GOLGA4Q13439 2230 aaKnown RBP15.4■□□□□ 0.06
UPK3A-201ENST00000216211 ITPR1Q14643 2758 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 I6L893 689 aaPredicted RBP15.4■□□□□ 0.06
UPK3A-201ENST00000216211 ATP9BO43861 1147 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 BNIP3LO60238 219 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 RTN2O75298 545 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 VASPP50552 380 aaPredicted RBP15.4■□□□□ 0.06
UPK3A-201ENST00000216211 CDH4P55283 916 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 BPIFB4P59827 614 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 MTA1Q13330 715 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 DRAP1Q14919 205 aaPredicted RBP15.4■□□□□ 0.06
UPK3A-201ENST00000216211 SHBQ15464 509 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 STX1AQ16623 288 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 INAVAQ3KP66 663 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 ALFQ53S48 1182 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 BRMS1LQ5PSV4 323 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 TAF3Q5VWG9 929 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 SMYD5Q6GMV2 418 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 Q6ZVU0 165 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 DSG4Q86SJ6 1040 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 ZDHHC17Q8IUH5 632 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 SH2D3CQ8N5H7 860 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 RNF214Q8ND24 703 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 PIP4K2CQ8TBX8 421 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 MDM1Q8TC05 714 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 ANP32BQ92688 251 aaKnown RBP15.4■□□□□ 0.06
UPK3A-201ENST00000216211 MUC3BQ9H195 1237 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 CCDC86Q9H6F5 360 aaKnown RBP15.4■□□□□ 0.06
UPK3A-201ENST00000216211 WDCPQ9H6R7 721 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 ANO10Q9NW15 660 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 RRN3Q9NYV6 651 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 FTSJ1Q9UET6 329 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 TBC1D30Q9Y2I9 924 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 MYLKQ15746 1914 aa15.4■□□□□ 0.06
UPK3A-201ENST00000216211 TDRD6O60522 2096 aaKnown RBP15.39■□□□□ 0.05
UPK3A-201ENST00000216211 PES1O00541 588 aaKnown RBP15.39■□□□□ 0.05
UPK3A-201ENST00000216211 LATO43561 262 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 PLRG1O43660 514 aaKnown RBP15.39■□□□□ 0.05
UPK3A-201ENST00000216211 RHOCP08134 193 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 CYP11B1P15538 503 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 ZNF18P17022 549 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 MAT2AP31153 395 aaKnown RBP15.39■□□□□ 0.05
UPK3A-201ENST00000216211 CDH5P33151 784 aaPredicted RBP15.39■□□□□ 0.05
UPK3A-201ENST00000216211 CXCR3P49682 368 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 DEUP1Q05D60 604 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 ANO6Q4KMQ2 910 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 C2CD6Q53TS8 623 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 SLC45A4Q5BKX6 768 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 FAM46CQ5VWP2 391 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 XYLT1Q86Y38 959 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 FAM131CQ96AQ9 280 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 C18orf8Q96DM3 657 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 TBCBQ99426 244 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 PSMB7Q99436 277 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 GDF3Q9NR23 364 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 TMPRSS4Q9NRS4 437 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 ARHGAP20Q9P2F6 1191 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 PPM1HQ9ULR3 514 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 STAP1Q9ULZ2 295 aa15.39■□□□□ 0.05
UPK3A-201ENST00000216211 ZFYVE26Q68DK2 2539 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 FAM149AA5PLN7 773 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 C1QTNF3-AMACRE9PGA6 284 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 TLR4O00206 839 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 CBX4O00257 560 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 MCF2LO15068 1137 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 ALOX15BO15296 676 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 SLC7A4O43246 635 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 SNAP91O60641 907 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 MT-CO1P00395 513 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 ITGAVP06756 1048 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 SRCP12931 536 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 ERCC5P28715 1186 aaPredicted RBP15.38■□□□□ 0.05
UPK3A-201ENST00000216211 GABRB2P47870 512 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 NXPH1P58417 271 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 CCDC173Q0VFZ6 552 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 CNTN1Q12860 1018 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 FAM102AQ5T9C2 384 aaPredicted RBP15.38■□□□□ 0.05
UPK3A-201ENST00000216211 KLHDC7AQ5VTJ3 777 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 AGBL4Q5VU57 503 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 NAPEPLDQ6IQ20 393 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 DHRS13Q6UX07 377 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 PRPF39Q86UA1 669 aaKnown RBP15.38■□□□□ 0.05
UPK3A-201ENST00000216211 ERICH1Q86X53 443 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 ZNF683Q8IZ20 524 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 GALNT15Q8N3T1 639 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 SAP25Q8TEE9 199 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 NT5C3BQ969T7 300 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 KDM4CQ9H3R0 1056 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 SAMSN1Q9NSI8 373 aaKnown RBP15.38■□□□□ 0.05
UPK3A-201ENST00000216211 DACH1Q9UI36 760 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 VPS51Q9UID3 782 aa15.38■□□□□ 0.05
UPK3A-201ENST00000216211 TPX2Q9ULW0 747 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms