RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 CFAP52Q8N1V2 620 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 USP33Q8TEY7 942 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 IL12RB2Q99665 862 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CCDC77Q9BR77 488 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CNOT10Q9H9A5 744 aaKnown RBP20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 EXOC1LA0A1B0GW35 172 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 RASA4BC9J798 803 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 GRM6O15303 877 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 RASA4O43374 803 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 AGTP01019 485 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 OR1E1P30953 314 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 SARNPP82979 210 aaKnown RBP20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ARL14EPQ8N8R7 260 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MICAL1Q8TDZ2 1067 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 SLC22A17Q8WUG5 538 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 LRRC39Q96DD0 335 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 SIGLEC10Q96LC7 697 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 PRICKLE1Q96MT3 831 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 EURLQ9NYK6 297 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 AGO1Q9UL18 857 aaKnown RBP20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CA3P07451 260 aa20.09■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MLNP12872 115 aa20.09■□□□□ 0.81
TNFRSF1A-201ENST00000162749 GCAP28676 217 aa20.09■□□□□ 0.81
TNFRSF1A-201ENST00000162749 PHBP35232 272 aa20.09■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MAPKAPK2P49137 400 aa20.09■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ZXDBP98169 803 aa20.09■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CYP4F8P98187 520 aa20.09■□□□□ 0.81
TNFRSF1A-201ENST00000162749 FAM107BQ9H098 131 aa20.09■□□□□ 0.81
TNFRSF1A-201ENST00000162749 RABGEF1Q9UJ41 708 aa20.09■□□□□ 0.81
TNFRSF1A-201ENST00000162749 BPTFQ12830 3046 aa20.09■□□□□ 0.81
TNFRSF1A-201ENST00000162749 NRG2O14511 850 aaPredicted RBP20.08■□□□□ 0.81
TNFRSF1A-201ENST00000162749 RAMP2O60895 175 aa20.08■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CDH16O75309 829 aa20.08■□□□□ 0.81
TNFRSF1A-201ENST00000162749 AP2A1O95782 977 aa20.08■□□□□ 0.81
TNFRSF1A-201ENST00000162749 HDCP19113 662 aa20.08■□□□□ 0.81
TNFRSF1A-201ENST00000162749 SMAD3P84022 425 aaKnown RBP20.08■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ADGRF1Q5T601 910 aa20.08■□□□□ 0.81
TNFRSF1A-201ENST00000162749 KCTD11Q693B1 232 aa20.08■□□□□ 0.81
TNFRSF1A-201ENST00000162749 LRRC8BQ6P9F7 803 aa20.08■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MPP5Q8N3R9 675 aa20.08■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MLPHQ9BV36 600 aaPredicted RBP20.08■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ZFP37Q9Y6Q3 630 aaPredicted RBP20.08■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CACNG3O60359 315 aa20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 PEX11BO96011 259 aa20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CHN1P15882 459 aa20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TSHRP16473 764 aa20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 RPS24P62847 133 aaKnown RBP20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 OLIG2Q13516 323 aa20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 QPCTQ16769 361 aa20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ELMOD1Q8N336 334 aa20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ADAMTS19Q8TE59 1207 aa20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MAML1Q92585 1016 aa20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MRPS31Q92665 395 aaKnown RBP20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CENPTQ96BT3 561 aa20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ACSS3Q9H6R3 686 aa20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 PLAC1Q9HBJ0 212 aa20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 PIH1D1Q9NWS0 290 aaKnown RBP20.08■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TCRBV9S1A1TA0A576 114 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 J3KR12 359 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TRDMT1O14717 391 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CCL16O15467 120 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 RB1P06400 928 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SPARCL1Q14515 664 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 POLD3Q15054 466 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 PARP15Q460N3 678 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 OTOP3Q7RTS5 596 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MAB21L3Q8N8X9 362 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 FBF1Q8TES7 1133 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 OXNAD1Q96HP4 312 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ZC3H7BQ9UGR2 993 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 STOML2Q9UJZ1 356 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TTLL3Q9Y4R7 772 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CPQQ9Y646 472 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 PRRC2BQ5JSZ5 2229 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 A0A1W2PRU2 124 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ERI2A8K979 691 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 RFPL2O75678 378 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SUN1O94901 812 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SGSHP51688 502 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 RABGAP1LQ5R372 815 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 PPM1LQ5SGD2 360 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 FATE1Q969F0 183 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 XPO6Q96QU8 1125 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 CORO1BQ9BR76 489 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 TBK1Q9UHD2 729 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 LGALS13Q9UHV8 139 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SZT2Q5T011 3432 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 MYOFQ9NZM1 2061 aa20.07■□□□□ 0.8
TNFRSF1A-201ENST00000162749 H3BNC9 293 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 GREM1O60565 184 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 USP12O75317 370 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SPAG6O75602 509 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 PIAS1O75925 651 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 HLA-DQB2P05538 268 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 YBEYP58557 167 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SHHQ15465 462 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ANO4Q32M45 955 aa20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 EBNA1BP2Q99848 306 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1A-201ENST00000162749 SELENOSQ9BQE4 189 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms