RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 CASS4Q9NQ75 786 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 PDLIM7Q9NR12 457 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 TRMT13Q9NUP7 481 aaKnown RBP13.34□□□□□ -0.27
HDAC7-201ENST00000080059 DDX60Q8IY21 1712 aaKnown RBP13.34□□□□□ -0.27
HDAC7-201ENST00000080059 LRP5O75197 1615 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 KRT16P08779 473 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 ITGB6P18564 788 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 IL10P22301 178 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 VHLP40337 213 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 SLC5A3P53794 718 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 DAOAP59103 153 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDAC7-201ENST00000080059 TEDDM1Q5T9Z0 273 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 TRMT10BQ6PF06 316 aaKnown RBP13.34□□□□□ -0.27
HDAC7-201ENST00000080059 SLC24A5Q71RS6 500 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 OTOP3Q7RTS5 596 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 RPAINQ86UA6 219 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 TMEM130Q8N3G9 435 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 MFSD3Q96ES6 412 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 UROC1Q96N76 676 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 NDNQ99608 321 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 TBC1D10AQ9BXI6 508 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 ZYG11BQ9C0D3 744 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 ZCWPW1Q9H0M4 648 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 MAN1C1Q9NR34 630 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 TMEM39AQ9NV64 488 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 RABGEF1Q9UJ41 708 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 V9GYQ6 96 aa13.34□□□□□ -0.27
HDAC7-201ENST00000080059 MYH7BA7E2Y1 1941 aa13.33□□□□□ -0.27
HDAC7-201ENST00000080059 MYH4Q9Y623 1939 aa13.33□□□□□ -0.27
HDAC7-201ENST00000080059 A8MX80 341 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 METTL18O95568 372 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 GAD2Q05329 585 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 CYLC2Q14093 348 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-201ENST00000080059 CYTH1Q15438 398 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 ZNF467Q7Z7K2 595 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-201ENST00000080059 TMEM110Q86TL2 294 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 UPF1Q92900 1129 aaKnown RBP eCLIP13.33□□□□□ -0.286e-10■■■■■ 30.1
HDAC7-201ENST00000080059 ZMAT2Q96NC0 199 aaKnown RBP13.33□□□□□ -0.28
HDAC7-201ENST00000080059 OSBPL7Q9BZF2 842 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 CLPBQ9H078 707 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 AAASQ9NRG9 546 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 SOX13Q9UN79 622 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 CITO14578 2027 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 PRKCZQ05513 592 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 TAF10Q12962 218 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 AGKQ53H12 422 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 TAPT1Q6NXT6 567 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 SLCO2A1Q92959 643 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 PIWIL1Q96J94 861 aaKnown RBP13.33□□□□□ -0.28
HDAC7-201ENST00000080059 TSC22D3Q99576 134 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 PTPRHQ9HD43 1115 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 CHRAC1Q9NRG0 131 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 UBA2Q9UBT2 640 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-201ENST00000080059 A0A1W2PQH9 124 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 ZNF197O14709 1029 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 OR1D2P34982 312 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 CDK7P50613 346 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 RNF43Q68DV7 783 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 SCARA3Q6AZY7 606 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 RETSATQ6NUM9 610 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 ADGRD1Q6QNK2 874 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 ANKS1BQ7Z6G8 1248 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 FAM228AQ86W67 206 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 SLC41A1Q8IVJ1 513 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 ZNF567Q8N184 647 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 SCAMP5Q8TAC9 235 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 SLC4A5Q9BY07 1137 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 PKD2L2Q9NZM6 624 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 FBXO5Q9UKT4 447 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 GON4LQ3T8J9 2241 aa13.33□□□□□ -0.28
HDAC7-201ENST00000080059 ESRRBO95718 433 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 F2P00734 622 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 PROCP04070 461 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 TPBGLP0DKB5 382 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 CYP3A5P20815 502 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 MAP4P27816 1152 aaKnown RBP13.32□□□□□ -0.28
HDAC7-201ENST00000080059 GRK4P32298 578 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 GRIA1P42261 906 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 WNT3AP56704 352 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 ABCE1P61221 599 aaKnown RBP13.32□□□□□ -0.28
HDAC7-201ENST00000080059 INTS6LQ5JSJ4 861 aaKnown RBP13.32□□□□□ -0.28
HDAC7-201ENST00000080059 CFAP52Q8N1V2 620 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 SPATA22Q8NHS9 363 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 KCTD4Q8WVF5 259 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 TSPAN18Q96SJ8 248 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 ACE2Q9BYF1 805 aaPredicted RBP13.32□□□□□ -0.28
HDAC7-201ENST00000080059 ING2Q9H160 280 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 SNX15Q9NRS6 342 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 KCNK4Q9NYG8 393 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 SEPT3Q9UH03 358 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 PCDHB8Q9UN66 801 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 KIAA0100Q14667 2235 aaKnown RBP13.32□□□□□ -0.28
HDAC7-201ENST00000080059 GRIN2DO15399 1336 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 IGKV6D-21A0A0A0MT36 114 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 CFAP99D6REC4 459 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 SLCO1B7G3V0H7 640 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 LYPLA1O75608 230 aaPredicted RBP13.32□□□□□ -0.28
HDAC7-201ENST00000080059 PDE5AO76074 875 aa13.32□□□□□ -0.28
HDAC7-201ENST00000080059 CRABP2P29373 138 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms