RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 HBS1LQ9Y450 684 aaKnown RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 ZCWPW2A0A1B0GU75 182 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 OR6C75A6NL08 312 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 MATN3O15232 486 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 B4GALT3O60512 393 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 PLIN3O60664 434 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 TOP3BO95985 862 aaKnown RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 MPOP05164 745 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 CPB1P15086 417 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 EZRP15311 586 aaKnown RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 HADHAP40939 763 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 MAGEA11P43364 429 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 TBX4P57082 545 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 RPL10AP62906 217 aaKnown RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 CAP1Q01518 475 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 MBTPS1Q14703 1052 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 DDR2Q16832 855 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 CCDC153Q494R4 210 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 HSP90AA5PQ58FG0 334 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 TRAF7Q6Q0C0 670 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 WDR75Q8IWA0 830 aaKnown RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 DCLK2Q8N568 766 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 ATP6V0D2Q8N8Y2 350 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 PXYLP1Q8TE99 480 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 ISL2Q96A47 359 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 MFSD3Q96ES6 412 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 PGLYRP2Q96PD5 576 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 FAM96AQ9H5X1 160 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 NMUR1Q9HB89 426 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 GLOD4Q9HC38 313 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 CD248Q9HCU0 757 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 OLA1Q9NTK5 396 aaKnown RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 LNPEPQ9UIQ6 1025 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 NUDT5Q9UKK9 219 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 HS3ST4Q9Y661 456 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 PLXNA3P51805 1871 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 KCNU1A8MYU2 1149 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 MAFKO60675 156 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 CCDC22O60826 627 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 AOC2O75106 756 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 SNNO75324 88 aaPredicted RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 RTN3O95197 1032 aaPredicted RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 SERPINE1P05121 402 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 KITP10721 976 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 SELPP16109 830 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 PAMP19021 973 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 CALB2P22676 271 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 GRK2P25098 689 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 PTPN4P29074 926 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 FAM189BP81408 668 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 UGP2Q16851 508 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 TEDDM1Q5T9Z0 273 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 FAM171A1Q5VUB5 890 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 SDHAF4Q5VUM1 108 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 C16orf46Q6P387 395 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 ARHGAP36Q6ZRI8 547 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 ZCCHC23Q6ZST2 131 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 OTOP3Q7RTS5 596 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 RTN4RL1Q86UN2 441 aaPredicted RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 CNTD1Q8N815 330 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 NSMCE1Q8WV22 266 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 PTCD2Q8WV60 388 aaKnown RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 DPF3Q92784 378 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 FBXO32Q969P5 355 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 IL12RB2Q99665 862 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 FICDQ9BVA6 458 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 SLC39A8Q9C0K1 460 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 KCNK13Q9HB14 408 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 HMX1Q9NP08 348 aaPredicted RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 ENTPD7Q9NQZ7 604 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 FBXO6Q9NRD1 293 aaPredicted RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 IARS2Q9NSE4 1012 aaKnown RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 GMIPQ9P107 970 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 DNAJB4Q9UDY4 337 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 MARCOQ9UEW3 520 aaPredicted RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 LRFN2Q9ULH4 789 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 PCDHB7Q9Y5E2 793 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 WASH4PA8MWX3 477 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 ARVCFO00192 962 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 FCHO1O14526 889 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 TRAFD1O14545 582 aaPredicted RBP8.41□□□□□ -1.06
VAMP3-201ENST00000054666 CACNG3O60359 315 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 WFS1O76024 890 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 PROCP04070 461 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 INHAP05111 366 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 TPH1P17752 444 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 YWHAQP27348 245 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 GRK4P32298 578 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 MAGEA12P43365 314 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 GPR15P49685 360 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 PSEN1P49768 467 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 CDK7P50613 346 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 AQP5P55064 265 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 BFSP2Q13515 415 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 PCLAFQ15004 111 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 PCID2Q5JVF3 399 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 MBLAC2Q68D91 279 aa8.41□□□□□ -1.06
VAMP3-201ENST00000054666 FSTL4Q6MZW2 842 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms