RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Ribc2Q9D4Q1 309 aa16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 DguokQ9QX60 277 aa16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 NumbQ9QZS3 653 aa16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Htatip2Q9Z2G9 242 aa16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Rreb1Q3UH06 1700 aaKnown RBP16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 BgnP28653 369 aa16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Cdc42P60766 191 aa16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 NfiaQ02780 532 aa16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Brip1Q5SXJ3 1174 aa16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Zfp189Q8BKP2 608 aa16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Abi3Q8BYZ1 367 aa16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Acsl6Q91WC3 697 aa16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 AasdhpptQ9CQF6 309 aa16.83■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Ms4a14A0A087WSD2 1232 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gm4131A0A140LJ24 318 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Vmn2r35E9Q7U8 861 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Rpl10aP53026 217 aaKnown RBP16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Slc38a5Q3U1J0 479 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Rnft2Q3UF64 445 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Ipcef1Q5DU31 406 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Sgsm3Q8VCZ6 750 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Mageb16Q9CWV4 363 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Entpd5Q9WUZ9 427 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Cul9Q80TT8 1865 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Disp3A3KFU9 1347 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Ap2s1P62743 142 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Tp53i13Q5F267 385 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gcnt3Q5JCT0 437 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Trmt10aQ8C1Z8 328 aaKnown RBP16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Scrn1Q9CZC8 414 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 PlekQ9JHK5 350 aaKnown RBP16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Eif4g3Q80XI3 1579 aaKnown RBP16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 IapP03975 557 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 CkmP07310 381 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Lcn3Q62471 182 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 VwdeQ6DFV8 926 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Grsf1Q8C5Q4 479 aaKnown RBP16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Olfr826Q8VFU6 313 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Olfr825Q8VFU7 320 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Tfap2dQ91ZK0 452 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Trappc5Q9CQA1 188 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Ing5Q9D8Y8 240 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Ggta1l1A2AUQ7 319 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Rad51dO55230 329 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Syt4P40749 425 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Slc39a12Q5FWH7 689 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Orm1Q60590 207 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Pcdhgc5Q91XW9 944 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Ddit4Q9D3F7 229 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Zfp53Q9Z117 652 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gm42372A0A1B0GT27 204 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 4932443I19RikA0A286YE38 169 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Krt83E9Q1Y9 479 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gm6526G3X9Q9 198 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Sbk2P0C5K1 362 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Klhl8P59280 629 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Cyp2c65Q148B1 490 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Fam35aQ3UEN2 891 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 McamQ8R2Y2 648 aaKnown RBP16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Wdr98Q8VC42 657 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Lrrc4Q99PH1 652 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Katna1Q9WV86 491 aa16.82■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Myh4Q5SX39 1939 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Olfr611K7N609 323 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Olfr612L7N462 323 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gp5O08742 567 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Neu1O35657 409 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gpatch2lQ6PE65 482 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Ttc16Q8C1F5 767 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Krt33aQ8K0Y2 404 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Coq9Q8K1Z0 313 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Ppp1r14aQ91VC7 147 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Rin2Q9D684 903 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Trappc8E9PWG2 1437 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Nme9A0A1L1SUL6 329 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 AV320801A2AWL3 467 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gm15023L7MUB4 467 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Ptpn22P29352 802 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Zbtb14Q08376 449 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Stip1Q60864 543 aaKnown RBP16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Fstl5Q8BFR2 847 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Nup54Q8BTS4 510 aaKnown RBP16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Pih1d1Q9CQJ2 290 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Htra1Q9R118 480 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Slc27a2O35488 620 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Tcea1P10711 301 aaKnown RBP16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Il1rnP25085 178 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Egfl7Q9QXT5 275 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Zfp28P10078 825 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 PlaaP27612 794 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gm4952Q5FW57 296 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Q6GQV0 436 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Baiap2Q8BKX1 535 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Srp68Q8BMA6 625 aaKnown RBP16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Scfd2Q8BTY8 684 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Akr1d1Q8VCX1 325 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Scgb2b20Q9JI02 112 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Hey2Q9QUS4 339 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Prdx3P20108 257 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 CidecP56198 239 aa16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms