RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Pcdhb9E9Q5G2 828 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Rgs2O08849 211 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Rpp30O88796 268 aaKnown RBP9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 RaraP11416 462 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 LeprP48356 1162 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Bmp1P98063 991 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Sox4Q06831 440 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm1673Q3UR78 90 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mthfd1lQ3V3R1 977 aaKnown RBP9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tmem247Q497K7 211 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Srek1ip1Q4V9W2 153 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Papss1Q60967 624 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cachd1Q6PDJ1 1288 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tas2r102Q7M717 329 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Elmod2Q8BGF6 293 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tmbim1Q8BJZ3 309 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 LRWD1Q8BUI3 648 aaKnown RBP9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 RfkQ8CFV9 155 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Esrp2Q8K0G8 717 aaKnown RBP9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Sumf1Q8R0F3 372 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tceanc2Q8R2M0 207 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Luzp1Q8R4U7 1068 aaKnown RBP9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Pafah2Q8VDG7 390 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 HnrnpuQ8VEK3 800 aaKnown RBP9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Olfr127Q8VF25 323 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Grhl1Q921D9 618 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Krt84Q99M73 603 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Nos1apQ9D3A8 503 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tchhl1Q9D3P1 638 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Serpinb12Q9D7P9 423 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Rhobtb1Q9DAK3 695 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 ChrdQ9Z0E2 948 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ate1Q9Z2A5 516 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Men1O88559 611 aaKnown RBP9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Prf1P10820 554 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cox5bP19536 128 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Adssl1P28650 457 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Kcnj12P52187 427 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 AbatP61922 500 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Pla2g6P97819 807 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 JPT1P97825 154 aaKnown RBP9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 CluQ06890 448 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 UbqlnlQ14DL0 610 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ap5z1Q3U829 807 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Rmdn3Q3UJU9 470 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Slc30a9Q5IRJ6 567 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 PrkciQ62074 595 aaKnown RBP9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Lrrtm4Q80XG9 590 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 GanabQ8BHN3 944 aaKnown RBP9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Peli3Q8BXR6 445 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cacnb2Q8CC27 655 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Fbxo18Q8K2I9 1042 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Il17rcQ8K4C2 698 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Fam110aQ8R184 296 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Zdhhc7Q91WU6 308 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 MrgprdQ91ZB8 321 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Clint1Q99KN9 631 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mospd2Q9CWP6 518 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tle2Q9WVB2 767 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Msh6P54276 1358 aaKnown RBP9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Pak1O88643 545 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mucl2P02815 138 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ccnd2P30280 289 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Eps15P42567 897 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 QrfprP83861 433 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Srbd1Q497V5 1015 aaKnown RBP9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Slc6a3Q61327 619 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Bcap31Q61335 245 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 DbnlQ62418 436 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ift122Q6NWV3 1182 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Znf182Q6P560 627 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Dync1li2Q6PDL0 492 aaKnown RBP9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tecpr1Q80VP0 1166 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mrps7Q80X85 242 aaKnown RBP9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tcaf1Q8BNE1 924 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Fam120cQ8C3F2 1091 aaKnown RBP9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tango6Q8C3S2 1079 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 DymQ8CHY3 669 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Rbm41Q8JZV4 413 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Col23a1Q8K4G2 532 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Vmn1r203Q8R273 311 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ppp6r2Q8R3Q2 923 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Atxn7Q8R4I1 867 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Nprl3Q8VIJ8 569 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Nudt21Q9CQF3 227 aaKnown RBP9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Wdr55Q9CX97 388 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Exo5Q9CXP9 373 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 DtnaQ9D2N4 746 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cpn2Q9DBB9 547 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Osbpl3Q9DBS9 855 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Vmn1r54Q9EPB8 315 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Atp13a1Q9EPE9 1200 aaKnown RBP9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 SqorQ9R112 450 aa9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Pacsin2Q9WVE8 486 aaKnown RBP9.26□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mical3Q8CJ19 1993 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Zfp69A2A761 587 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Zfp990B1AVN5 605 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm20425E9Q035 978 aaKnown RBP9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Fgf15O35622 218 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Trdmt1O55055 415 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms