RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Q9D4A5 307 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Nme7Q9QXL8 395 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Coro1cQ9WUM4 474 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cyp2j12G3UXT0 502 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Vmn2r70K7N702 854 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Neu1O35657 409 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gnao1P18872 354 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Slc6a13P31649 602 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Elk4P41158 430 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gm1587Q3UT80 123 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Mthfd1lQ3V3R1 977 aaKnown RBP9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Prrt3Q6PE13 971 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 C6.1alQ7M757 291 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Olfr1105Q7TR58 312 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Atp2c1Q80XR2 918 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Zdhhc19Q810M5 347 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Lrrc24Q8BHA1 521 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Clptm1lQ8BXA5 539 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ctu1Q99J10 420 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fam90a1bQ9D4F3 419 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Agpat3Q9D517 376 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ruvbl2Q9WTM5 463 aaKnown RBP9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Nrf1Q9WU00 503 aa9.97□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gm6370A0A0G2JGX9 315 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gm281D3Z1Y0 860 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 1700024B05RikE9Q6D7 167 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Dcdc2bF7BCK0 340 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gm6309L7N481 315 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Hcn3O88705 779 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 ClgnP52194 611 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 ThraP63058 492 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Q3U4G0 281 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Mtnr1aQ61184 353 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Otud6aQ6IE21 290 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cspg5Q71M36 566 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Tigd3Q7TM95 470 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Pqlc1Q80XM9 271 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Smndc1Q8BGT7 238 aaKnown RBP9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Arhgef3Q91X46 524 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Psip1Q99JF8 528 aaKnown RBP9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gtf2ird2Q99NI3 936 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Pgm3Q9CYR6 542 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ccdc130Q9D516 385 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Spata1Q9D5R4 444 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Spata9Q9D9R3 252 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cyp4f14Q9EP75 524 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Dnaja2Q9QYJ0 412 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 DgkeQ9R1C6 564 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Nup210lQ9D2F7 1881 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Rnf19bA2A7Q9 732 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Znf683I7HJS4 458 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Matn2O08746 956 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ap2a1P17426 977 aaKnown RBP9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cyp2f2P33267 491 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ndst1Q3UHN9 882 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Etaa1Q5SVT3 877 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Olfr464Q5SW48 313 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Bcar1Q61140 874 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Zpbp2Q6X786 326 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fads6Q80UG1 342 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fam181bQ80VF6 417 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gtf3c4Q8BMQ2 817 aaKnown RBP9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cndp1Q8BUG2 492 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Pyhin1Q8BV49 420 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Nkiras1Q8CEC5 192 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Rrp15Q9CYX7 281 aaKnown RBP9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Tmod3Q9JHJ0 352 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Tnfrsf10bQ9QZM4 381 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Apobec2Q9WV35 224 aa9.96□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Pcdh7A0A0A6YY83 1255 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 JchainP01592 159 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 RapsnP12672 412 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Oaz1P54369 227 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 ArsiQ32KI9 573 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zfp217Q3U0X6 1041 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Trafd1Q3UDK1 580 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Foxred2Q3USW5 665 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 PtprrQ62132 656 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Slc18a2Q8BRU6 517 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Arhgef33Q8BW86 850 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 OsgepQ8BWU5 335 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cog4Q8R1U1 785 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 GatbQ99JT1 557 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rnf111Q99ML9 989 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ssxb1Q9CPU1 170 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Acot13Q9CQR4 140 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 P2yr13Q9D8I2 337 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ampd2Q9DBT5 798 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Paqr5Q9DCU0 330 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ppp2r3cQ9JK24 453 aa9.96□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Klhl32A2AJX0 620 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zscan4bE9Q3G0 505 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Chrna4O70174 629 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Hsd17b7O88736 334 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pgk2P09041 417 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mmp3P28862 477 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Aldh3a1P47739 453 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tmem237Q3V0J1 427 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Clhc1Q5M6W3 596 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 PkdccQ5RJI4 492 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms