RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Rwdd4Q9CPR1 188 aa9.07□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Cep19Q9CQA8 163 aa9.07□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Hddc3Q9D114 179 aa9.07□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Efhc2Q9D485 750 aa9.07□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Il1rl2Q9ERS7 574 aa9.07□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ecel1Q9JMI0 775 aa9.07□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 HephQ9Z0Z4 1157 aa9.07□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Bscl2Q9Z2E9 383 aa9.07□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Elf4Q9Z2U4 655 aa9.07□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Fam43bA2AM80 330 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Patl2A2ARM1 529 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 E9QMW4 1145 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Vmn2r39L7N2E5 861 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Cyp4a14O35728 507 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Tap1P21958 724 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Dsc3P55850 896 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 RnaselQ05921 735 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Zmym1Q3TJB1 983 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Znf746Q3U133 652 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Nudt18Q3U2V3 323 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Spout1Q3UHX9 385 aaKnown RBP9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Naf1Q3UMQ8 489 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ermp1Q3UVK0 898 aaKnown RBP9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Grm5Q3UVX5 1203 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 PterQ60866 349 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Six4Q61321 775 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 MafkQ61827 156 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Glra2Q7TNC8 452 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Fam185aQ7TPD2 378 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Q810S2 196 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Snx14Q8BHY8 964 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Rspry1Q8BVR6 576 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Psapl1Q8C1C1 522 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gpr158Q8C419 1200 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ccdc187Q8C5V8 958 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ipo11Q8K2V6 975 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 RhoqQ8R527 205 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gramd1aQ8VEF1 722 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Mrpl14Q9D1I6 145 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Krt20Q9D312 431 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Lman2Q9DBH5 358 aaKnown RBP9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Asap1Q9QWY8 1147 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Dcpp2E9PYC2 171 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gm4450E9Q007 373 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ccdc188F6WEU2 249 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Pcdh9F8VPK8 1237 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Rab11fip2G3XA57 512 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Fignl2J3QK54 644 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Dcpp1L7N1X9 171 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Il13ra1O09030 424 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Tnk2O54967 1055 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 FasP25446 327 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gdf5P43027 495 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Atp8a1P70704 1164 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ncf4P97369 339 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Npas2P97460 816 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Pyroxd1Q3TMV7 498 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Eri2Q5BKS4 688 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Rap1gap2Q5SVL6 712 aaKnown RBP9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Hsd3b4Q61767 373 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Smad2Q62432 467 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ccdc85bQ6PDY0 202 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 CtifQ6PEE2 600 aaKnown RBP9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Atp1a2Q6PIE5 1020 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ccdc154Q6RUT8 657 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Tas2r129Q7M709 320 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 SrlQ7TQ48 910 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 LnpkQ7TQ95 425 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Zmpste24Q80W54 475 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Baiap2l2Q80Y61 522 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Cox14Q8BH51 57 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Zfp595Q8BIN6 625 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Zfp719Q8BIV1 735 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Dupd1Q8BK84 215 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Prss50Q8BLH5 439 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Smoc1Q8BLY1 463 aaKnown RBP9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Usp43Q8BUM9 1132 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Trerf1Q8BXJ2 1205 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Phactr3Q8BYK5 558 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 MmaaQ8C7H1 415 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gbp5Q8CFB4 590 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Appl1Q8K3H0 707 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Tmem174Q9DCX7 243 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Stk11Q9WTK7 436 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Il18rapQ9Z2B1 614 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Pi4kaE9Q3L2 2105 aa9.06□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 6030498E09RikB1AX85 169 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Vmn1r39G3UWE6 305 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 ChkbO55229 394 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Htr7P32304 448 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Rab20P35295 233 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Acot8P58137 320 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Cdh6P97326 790 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Fmo3P97501 534 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 G2e3Q5RJY2 716 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Rnf215Q5SPX3 379 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Zdhhc24Q6IR37 284 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Amer3Q6NS69 780 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Rxfp4Q7TQP4 414 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Hpcal4Q8BGZ1 191 aa9.05□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms