RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Pitpnm2Q6ZPQ6 1335 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 Magea10A2AMW4 325 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 Aqp8P56404 261 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 DtymkP97930 212 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 Ccser2Q3UHI0 833 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 4933427I04RikQ3V053 235 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 Efcab7Q8VDY4 628 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 Pcdhb6Q91XZ4 772 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 Kcnt2D3Z649 1135 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 DbiP31786 87 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 Copz1P61924 177 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 Stard3Q61542 446 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 Arl10Q9QXJ4 243 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 Tmem2Q5FWI3 1383 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 Kif13aQ9EQW7 1749 aa14.15□□□□□ -0.14
Col5a1-201ENSMUST00000028280 Cdk7Q03147 346 aa14.15□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Larp4bQ6A0A2 741 aaKnown RBP14.15□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Lca5lQ8C0X0 741 aa14.15□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Pitrm1Q8K411 1036 aaKnown RBP14.15□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rsph1Q8VIG3 301 aa14.15□□□□□ -0.15
Col5a1-201ENSMUST00000028280 CoprsQ9CQ13 173 aa14.15□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ints11Q9CWS4 600 aa14.15□□□□□ -0.15
Col5a1-201ENSMUST00000028280 9230104L09RikQ9D264 133 aa14.15□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rabl3Q9D4V7 236 aa14.15□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Fam227bQ9D518 532 aa14.15□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rgs1Q9JL25 209 aa14.15□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Vmn2r77L7N2B7 854 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Klrb1Q0ZUP1 214 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Pcnx4Q3UVY5 1174 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ca9Q8VHB5 437 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Acot13Q9CQR4 140 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Snx7Q9CY18 387 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Serpina1fQ9DCQ7 411 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ehd1Q9WVK4 534 aaKnown RBP14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Vmn2r104E9Q2J5 860 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gucy1a2F8VQK3 730 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Frg1P97376 258 aaKnown RBP14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 rp9P97762 213 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Nek10Q3UGM2 1111 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Nt5dc3Q3UHB1 546 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Kbtbd8Q3UQV5 599 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Tbc1d24Q3UUG6 561 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Prkg2Q61410 762 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Crls1Q80ZM8 303 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Samd4aQ8CBY1 711 aaKnown RBP14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 GmfbQ9CQI3 142 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Fkbp9Q9Z247 570 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 PtpruB1AUH1 1446 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ugt1a8D3Z748 530 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ugt1a10E9PXN7 530 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 PtenO08586 403 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Nfatc2ipO09130 412 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 NsmafO35242 920 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Sult3a1O35403 293 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mrgprb8Q7TN51 330 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Tmx2Q9D710 295 aaKnown RBP14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rnft1Q9DCN7 395 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Cog8Q9JJA2 640 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Aqp5Q9WTY4 265 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Dip2aQ8BWT5 1523 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Lcn5A2AJB7 192 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Shoc2O88520 582 aaKnown RBP14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Got1P05201 413 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rc3h2P0C090 1187 aaKnown RBP14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gja1P23242 382 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ccnb1P24860 430 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mxd3Q80US8 206 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Arih1Q9Z1K5 555 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 AdgbG3UZ78 1657 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Bmpr2O35607 1038 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Serac1Q3U213 654 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Dpp10Q6NXK7 797 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Wdr98Q8VC42 657 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 MispQ9D279 648 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Tmem176aQ9DCS1 244 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Chrac1Q9JKP8 129 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Net1Q9Z206 595 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Tuba3aP05214 450 aaKnown RBP14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 FesP16879 822 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Cdh4P39038 913 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ccr4P51680 360 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 CluQ06890 448 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Eif1adQ3THJ3 170 aaKnown RBP14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 AW551984Q8BGF0 804 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Olfr1302Q8VGE9 315 aa14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ascc3E9PZJ8 2198 aaKnown RBP14.14□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mtco1P00397 514 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 P3h1Q3V1T4 739 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Celf6Q7TN33 460 aaKnown RBP14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Zdhhc12Q8VC90 267 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 FggQ8VCM7 436 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 GarsQ9CZD3 729 aaKnown RBP14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ndufaf6A2AIL4 333 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Kifc5bE9PUA5 672 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Xirp1O70373 1129 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 FshrP35378 692 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Dlg1Q811D0 905 aaKnown RBP14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Efcab1Q9D3N2 212 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Med8Q9D7W5 268 aa14.13□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Med11Q9D8C6 117 aa14.13□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms