RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Cetn2Q9R1K9 172 aa11.16□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Pacsin2Q9WVE8 486 aaKnown RBP11.16□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Igkv5-39A0A0G2JDV4 115 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 4933424G06RikA0A140LIP3 267 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Tex13aA2AFS9 377 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ttc23lA6H6E9 458 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Usp51B1AY15 661 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 NcapgE9PWG6 1004 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Gm5814J3QP80 125 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ercc2O08811 760 aaKnown RBP11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Prkag1O54950 330 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Chrm1P12657 460 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 ZfaP23607 742 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Il12bP43432 335 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Rps24P62849 133 aaKnown RBP11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 SiaeP70665 541 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Gjb5Q02739 271 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 9130409I23RikQ3TS87 320 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Gm853Q3UNZ2 425 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Efr3bQ6ZQ18 817 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 AdalQ80SY6 360 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Slc43a1Q8BSM7 564 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Apol7cQ8C6E1 369 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 MmaaQ8C7H1 415 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ccdc28aQ8CEI3 192 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Phc3Q8CHP6 981 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Vmn1r206Q8R277 312 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ccdc12Q8R344 166 aaKnown RBP11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 McmbpQ8R3C0 642 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Pcolce2Q8R4W6 414 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Spns2Q91VM4 549 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ubxn6Q99PL6 442 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Cuedc2Q9CXX9 284 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Satl1Q9D5N8 744 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Slc7a9Q9QXA6 487 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 PtprdQ64487 1912 aa11.15□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Trpm6Q8CIR4 2028 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Usp24B1AY13 2617 aaKnown RBP11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Apba1B2RUJ5 842 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Olfr414E9Q5P8 317 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Vmn1r55E9Q8I6 310 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Dpysl2O08553 572 aaKnown RBP11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 CkmP07310 381 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Tcp1P11983 556 aaKnown RBP11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Cr2P19070 1025 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Lmnb2P21619 596 aaKnown RBP11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Gja4P28235 333 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Mapkapk2P49138 386 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Cdkn1cP49919 348 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Emilin3P59900 758 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Trim43aQ3TL54 445 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Ccndbp1Q3TVC7 356 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Cdv3Q4VAA2 281 aaKnown RBP11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Pabpc2Q62029 628 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Syn2Q64332 586 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Tdpoz3Q717B4 365 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Olfr1057Q7TR75 315 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Kxd1Q80XH1 177 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Q8BGD0 127 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Cox15Q8BJ03 413 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Stx16Q8BVI5 326 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Nlrp4bQ8C6J9 863 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Zc2hc1cQ8CCG1 527 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Aldh4a1Q8CHT0 562 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Tldc1Q8K0P3 455 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Cadm1Q8R5M8 456 aaKnown RBP11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Apol9aQ8VDU3 310 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Caap1Q8VDY9 356 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Olfr342Q8VGK7 312 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Akr1c14Q91WT7 323 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Pcdha10Q91Y20 946 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 March2Q99M02 246 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 MtapQ9CQ65 283 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Rec114Q9CWH4 259 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Dcp2Q9CYC6 422 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Thumpd2Q9CZB3 528 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Sec13Q9D1M0 322 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Fam114a1Q9D281 569 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Rhobtb1Q9DAK3 695 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Jph3Q9ET77 744 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Elf2Q9JHC9 593 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Lat2Q9JHL0 203 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 D7h11orf16Q9JJR6 402 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Asap1Q9QWY8 1147 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Pcsk1nQ9QXV0 258 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Tmem59Q9QY73 323 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Plod1Q9R0E2 728 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Chrna6Q9R0W9 494 aa11.14□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Cfap221A9Q751 836 aa11.13□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Fbrsl1E9Q9T0 1031 aa11.13□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Pde8aO88502 823 aa11.13□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Mucl2P02815 138 aa11.13□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Il2P04351 169 aa11.13□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Hoxb4P10284 250 aa11.13□□□□□ -0.63
Tubb1-201ENSMUST00000016399 PdgfraP26618 1089 aa11.13□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Sox18P43680 377 aa11.13□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Plk2P53351 682 aa11.13□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Tcp11Q01755 566 aa11.13□□□□□ -0.63
Tubb1-201ENSMUST00000016399 Ddr1Q03146 911 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms