RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Nrg4Q9WTX4 115 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Vmn1r39G3UWE6 305 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Ush1gQ80T11 461 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Lair1Q8BG84 263 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 LdahQ8BVA5 326 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Clptm1lQ8BXA5 539 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Slc5a2Q923I7 670 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Gprc5bQ923Z0 410 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Lyrm1Q9CQB7 122 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Cyp2ab1S4R196 498 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 CercamA3KGW5 592 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 AlpiF8VPQ6 554 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Lrfn1Q2WF71 766 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 PkdccQ5RJI4 492 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 PrcpQ7TMR0 491 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 AA792892Q8C6S1 278 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Gpn2Q8VEJ1 310 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 GrapQ9CX99 217 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Znf106O88466 1888 aa17.17■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Vmn2r65G3X931 845 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 SpibO35906 267 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Capns1O88456 269 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 LgmnO89017 435 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 P01668 110 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Cdc25bP30306 576 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Large2Q5XPT3 690 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Cfap206Q6PE87 622 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Nup85Q8R480 656 aaKnown RBP17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Ggt7Q99JP7 662 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 SncaipQ99ME3 962 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Il20Q9JKV9 176 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Atp11cQ9QZW0 1129 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 St6galnac4Q9R2B6 360 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Gm21083A0A0G2JFD5 256 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 1600015I10RikE9Q745 711 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Gm4758L7N258 96 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Sesn2P58043 480 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Neurl1bQ0MW30 546 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Tmem26Q3UP23 366 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Rnf215Q5SPX3 379 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Slc7a4Q8BLQ7 635 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Tex19.1Q99MV2 351 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 SerhlQ9EPB5 311 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Prl3b1P09586 222 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Wnt3aP27467 352 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 PlaaP27612 794 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Il12aP43431 215 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Armc7Q3UJZ3 198 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 StyxQ60969 223 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Nemp1Q6ZQE4 437 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Fam102aQ78T81 392 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Adamts2Q8C9W3 1213 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Znf639Q99KZ6 485 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Q9D1K7 174 aaKnown RBP17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Usp21Q9QZL6 566 aa17.16■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Has3O08650 554 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Klc2O88448 599 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 PolP11369 1281 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 RxraP28700 467 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Ccr1P51675 355 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Trpv5P69744 723 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Slc38a5Q3U1J0 479 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Hsph1Q61699 858 aaKnown RBP17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Srd5a1Q68FF9 255 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Clec18aQ7TSQ1 534 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Amer2Q8CCJ4 672 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 St7Q99M96 577 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Adam17Q9Z0F8 827 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Vmn2r61L7N2B8 865 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Pgk2P09041 417 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 JunbP09450 344 aaKnown RBP17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Btg3P50615 252 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 MafP54843 370 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Polr2iP60898 125 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 PrkcgP63318 697 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Jdp2P97875 163 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Pdcd1Q02242 288 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Lrch2Q3UMG5 773 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Arcn1Q5XJY5 511 aaKnown RBP17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Map2k2Q63932 401 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Dync1li2Q6PDL0 492 aaKnown RBP17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 SelenomQ8VHC3 145 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Rmnd5bQ91YQ7 393 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Rilpl2Q99LE1 197 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Itih4A6X935 942 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Kdelc2G5E897 503 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Soat2O88908 525 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Ptpn22P29352 802 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Shmt1P50431 478 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Snx27Q3UHD6 539 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Tom1l2Q5SRX1 507 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Pcbp2Q61990 362 aaKnown RBP17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Jade1Q6ZPI0 834 aaKnown RBP17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 LipmQ8K2A6 422 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 PacrglQ9D3X5 248 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Syap1Q9D5V6 365 aa17.15■□□□□ 0.34
Ctcf-201ENSMUST00000005841 SfnO70456 248 aaKnown RBP17.14■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Ybx1P62960 322 aaKnown RBP17.14■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Krt32Q62168 407 aa17.14■□□□□ 0.34
Ctcf-201ENSMUST00000005841 TufmQ8BFR5 452 aa17.14■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms