RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Grin3aA2AIR5 1135 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Slc4a11A2AJN7 862 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Herc6F2Z461 1003 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 IkbkgO88522 412 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Mmp3P28862 477 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Mgat3Q10470 538 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Krt32Q62168 407 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Armcx2Q6A058 784 aaKnown RBP16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 DdnQ80TS7 710 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 TufmQ8BFR5 452 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fra10ac1Q8BP78 315 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Brat1Q8C3R1 822 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fnbp1lQ8K012 605 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Mospd1Q8VEL0 213 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 HnmtQ91VF2 295 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Pcdhb2Q91Y00 799 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ugp2Q91ZJ5 508 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gmpr2Q99L27 348 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Golga4Q91VW5 2238 aa16.5■□□□□ 0.23
Trim28-201ENSMUST00000005705 Vmn2r121A2BE32 847 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Kng1O08677 661 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Myl4P09541 193 aaKnown RBP16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Cd3gP11942 182 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Il12bP43432 335 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Pold1P52431 1105 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Vps45P97390 570 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ptchd3Q0EEE2 906 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Trim75Q3UWZ0 467 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Osbp2Q5QNQ6 908 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Olfr464Q5SW48 313 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Dclk2Q6PGN3 756 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Smpd4Q6ZPR5 823 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fuca2Q99KR8 461 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Mrps17Q9CQE3 120 aaKnown RBP16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gm6205E9PZS2 359 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gm3383J3QQ59 259 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gm3164L7N2B9 238 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gm3239L7N2D9 227 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Chrna4O70174 629 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Rdh7O88451 316 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 PdgfrbP05622 1098 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Alas2P08680 587 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 RnaselQ05921 735 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ndst1Q3UHN9 882 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Zfp956Q3UZY6 572 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Myo1gQ5SUA5 1024 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Il17aQ62386 158 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Xylt1Q811B1 953 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 OsgepQ8BWU5 335 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 SgczQ8BX51 311 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gm6367Q8C6L9 287 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Pgm2l1Q8CAA7 621 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Cabcoco1Q8CDT7 208 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 FktnQ8R507 461 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Plbd1Q8VCI0 550 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Trpd52l3Q9CQ14 231 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Cldn22Q9D7U6 220 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Kctd4Q9D7X1 259 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 1700123K08RikQ9D991 295 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Sbno2Q7TNB8 1349 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 E230025N22RikG5E8S3 482 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ercc2O08811 760 aaKnown RBP16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gnao1P18872 354 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ikzf1Q03267 517 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Mettl17Q3U2U7 461 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Rad54bQ6PFE3 886 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gpr139Q80UC8 345 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gpr20Q8BYC4 358 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Afap1l1Q8BZI0 768 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Snapc1Q8K0S9 389 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Gtse1Q8R080 741 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ccdc92Q8VDN4 314 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Txndc9Q9CQ79 226 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Egfl7Q9QXT5 275 aa16.49■□□□□ 0.23
Trim28-201ENSMUST00000005705 Slc1a6O35544 561 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Zfy2P20662 777 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 DesP31001 469 aaKnown RBP16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Grm1P97772 1199 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Ankrd34bQ3UUF8 508 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Srbd1Q497V5 1015 aaKnown RBP16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Msi1Q61474 362 aaKnown RBP16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Tbc1d17Q8BYH7 645 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Sec16bQ91XT4 1051 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Socs4Q91ZA6 436 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fam136aQ9CR98 138 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Fndc8Q9D2H8 321 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Prorsd1Q9D820 169 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Trpc4Q9QUQ5 974 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Dnaja2Q9QYJ0 412 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Chek2Q9Z265 546 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f15A0A087WR44 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f12A0A0A0MQP3 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f9A2BFZ7 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f7A2BHG6 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f19A2CG71 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f10A2CG92 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f3A2CGC2 496 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f13B8JKF6 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f2J3QMS5 498 aa16.48■□□□□ 0.23
Trim28-201ENSMUST00000005705 Btbd35f25J3QMV9 498 aa16.48■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms