RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Gja6Q6S5G4 283 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Smndc1Q8BGT7 238 aaKnown RBP16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Znf385bQ8BXJ8 482 aaKnown RBP16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Fam160b1Q8CDM8 764 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Rem2Q8VEL9 341 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Adcy4Q91WF3 1077 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Utp11Q9CZJ1 253 aaKnown RBP16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Gpr45Q9EQQ4 373 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Rab27aQ9ERI2 221 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Kcnq2Q9Z351 759 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Rpl9-ps1S4R1R7 191 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Zmynd8A2A484 1235 aaKnown RBP16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Olfr1160A2AVT0 319 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Olfr220E9Q050 325 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 SmgcF6VRN1 385 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 LynP25911 512 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Scn2bQ56A07 215 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Paqr6Q6TCG5 343 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Tas2r125Q7M710 311 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Slc16a9Q7TM99 508 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Nacc1Q7TSZ8 514 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Xylt1Q811B1 953 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Cops7bQ8BV13 264 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Ccdc63Q8CDV6 558 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Pcdhb7Q8CDY9 829 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Evi2bQ8VD58 444 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Smg8Q8VE18 991 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Tcaf2Q921K8 919 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Ndufa10Q99LC3 355 aaKnown RBP16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Trim42Q9D2H5 723 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Borcs5Q9D920 195 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Dmap1Q9JI44 468 aa16.73■□□□□ 0.27
Shh-201ENSMUST00000002708 Pappa2E9PZ87 1789 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 A0A1Y7VP24 259 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Klhl33G3UW92 533 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Serpinb2P12388 415 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 CtswP56203 371 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Trim71Q1PSW8 855 aaKnown RBP16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Fscn2Q32M02 492 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 OsbpQ3B7Z2 805 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Rnf157Q3TEL6 685 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Mief2Q5NCS9 454 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 PigwQ8C398 503 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Q8CCC3 530 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Tdrd7Q8K1H1 1086 aaKnown RBP16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Plbd1Q8VCI0 550 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Poc5Q9DBS8 558 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Pold3Q9EQ28 462 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Ddx21Q9JIK5 851 aaKnown RBP16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Dcun1d1Q9QZ73 259 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Zfp358E9Q8M1 571 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Crabp2P22935 138 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Il12aP43431 215 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Mthfd1lQ3V3R1 977 aaKnown RBP16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Slc20a1Q61609 681 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Lig4Q8BTF7 911 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 TbcdQ8BYA0 1196 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Cep57Q8CEE0 500 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Arhgef3Q91X46 524 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 B4galt3Q91YY2 395 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 GatbQ99JT1 557 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Nmd3Q99L48 503 aaKnown RBP16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Lysmd3Q99LE3 305 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Rnf111Q99ML9 989 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Ndc80Q9D0F1 642 aaKnown RBP16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Ccdc130Q9D516 385 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Pgam1Q9DBJ1 254 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Cdc42ep5Q9Z0X0 150 aa16.72■□□□□ 0.27
Shh-201ENSMUST00000002708 Cyp2b13A6H6J2 491 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Sh2d4bA6X942 431 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 A630010A05RikA9C473 232 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 A930018M24RikB7ZMY3 218 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 AvilO88398 819 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Gnao1P18872 354 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Tubgcp3P58854 905 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Ezh1P70351 747 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Has1Q61647 583 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Arl13bQ640N2 427 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Rftn2Q8CHX7 500 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Ssx2ipQ8VC66 615 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Sorcs3Q8VI51 1219 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 CtsqQ91ZF4 343 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Def8Q99J78 448 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Tbc1d20Q9D9I4 402 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Extl1Q9JKV7 669 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Mbtps1Q9WTZ2 1052 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Trpm7Q923J1 1863 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Bclaf3A2AG58 752 aaKnown RBP16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Gm3173A6NAS3 172 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Gm3020E9Q3J7 150 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Cyp4f17G3UW78 524 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Gm2897K7N6T7 172 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 AladP10518 330 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Elk4P41158 430 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Caprin2Q05A80 1031 aaKnown RBP16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Cd36Q08857 472 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Aarsd1Q3THG9 412 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Fra10ac1Q8BP78 315 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Ccdc151Q8BSN3 593 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Gm3411Q8C7R2 150 aa16.71■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 91.1 ms