RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 PRKCQQ04759 706 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 DSC3Q14574 896 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 AGAP7PQ5VUJ5 663 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 ZNF354CQ86Y25 554 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 RNF135Q8IUD6 432 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 ZCCHC9Q8N567 271 aaKnown RBP7.26□□□□□ -1.25
NECAP1-213ENST00000638883 ZNF420Q8TAQ5 688 aaPredicted RBP7.26□□□□□ -1.25
NECAP1-213ENST00000638883 DMRTB1Q96MA1 342 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 C7orf26Q96N11 449 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 AGPAT1Q99943 283 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 OR2B2Q9GZK3 357 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 UPF3AQ9H1J1 476 aaKnown RBP7.26□□□□□ -1.25
NECAP1-213ENST00000638883 UBA2Q9UBT2 640 aaPredicted RBP7.26□□□□□ -1.25
NECAP1-213ENST00000638883 PCDHA6Q9UN73 950 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 POLHQ9Y253 713 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 PCDHA8Q9Y5H6 950 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 PMF1-BGLAPU3KQ54 211 aa7.26□□□□□ -1.25
NECAP1-213ENST00000638883 POTEMA6NI47 508 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 SAC3D1A6NKF1 404 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 GCNT3O95395 438 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 CD48P09326 243 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 SLURP2P0DP57 97 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 CCND2P30279 289 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 ZNF132P52740 706 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 NFIXQ14938 502 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 FASTKD3Q14CZ7 662 aaKnown RBP7.25□□□□□ -1.25
NECAP1-213ENST00000638883 PRKD1Q15139 912 aaPredicted RBP7.25□□□□□ -1.25
NECAP1-213ENST00000638883 EPHA7Q15375 998 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 ANKRD26P1Q6NSI1 321 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 C11orf63Q6NUN7 778 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 FAM122CQ6P4D5 195 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 ARMC8Q8IUR7 673 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 GALNT12Q8IXK2 581 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 ZNF687Q8N1G0 1237 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 AGR3Q8TD06 166 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 TBATAQ96M53 351 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 PKP2Q99959 881 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 EBF4Q9BQW3 602 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 MROQ9BYG7 248 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 FANCEQ9HB96 536 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.25□□□□□ -1.25
NECAP1-213ENST00000638883 MRPL39Q9NYK5 338 aaKnown RBP7.25□□□□□ -1.25
NECAP1-213ENST00000638883 VANGL2Q9ULK5 521 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 PLA2G4CQ9UP65 541 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 B3GNT3Q9Y2A9 372 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 C12orf71A8MTZ7 269 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 TRIM49D1C9J1S8 452 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 EDIL3O43854 480 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 GLULP15104 373 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 NMT1P30419 496 aaKnown RBP7.25□□□□□ -1.25
NECAP1-213ENST00000638883 STAT3P40763 770 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 ALDH3B2P48448 385 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 GJA9P57773 515 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 NFATC3Q12968 1075 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 OXA1LQ15070 435 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 ABCB5Q2M3G0 1257 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 LSM12Q3MHD2 195 aaKnown RBP7.25□□□□□ -1.25
NECAP1-213ENST00000638883 DCUN1D2Q6PH85 259 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 RNF111Q6ZNA4 994 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 KCTD8Q6ZWB6 473 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 DSG4Q86SJ6 1040 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 C7orf57Q8NEG2 295 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 LILRB1Q8NHL6 650 aaPredicted RBP7.25□□□□□ -1.25
NECAP1-213ENST00000638883 SHKBP1Q8TBC3 707 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 ADAMTS16Q8TE57 1224 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 APOPT1Q96IL0 206 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 KLHL32Q96NJ5 620 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 ALPK1Q96QP1 1244 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 RANBP9Q96S59 729 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 EMILIN2Q9BXX0 1053 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 SEZ6LQ9BYH1 1024 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 NYXQ9GZU5 481 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 FAM96AQ9H5X1 160 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 KCNK13Q9HB14 408 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 UBE2TQ9NPD8 197 aaPredicted RBP7.25□□□□□ -1.25
NECAP1-213ENST00000638883 AURKCQ9UQB9 309 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 SNX5Q9Y5X3 404 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 TPST1O60507 370 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 RALAP11233 206 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 POLR2CP19387 275 aaPredicted RBP7.25□□□□□ -1.25
NECAP1-213ENST00000638883 CD247P20963 164 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 ME2P23368 584 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 RPS8P62241 208 aaKnown RBP7.25□□□□□ -1.25
NECAP1-213ENST00000638883 CDK18Q07002 472 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 HERC3Q15034 1050 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 TEDDM1Q5T9Z0 273 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 FRMD5Q7Z6J6 570 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 SLCO6A1Q86UG4 719 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 KBTBD6Q86V97 674 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 TDRPQ86YL5 185 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.25□□□□□ -1.25
NECAP1-213ENST00000638883 CADM2Q8N3J6 435 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 KYQ8NBH2 561 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 PDPRQ8NCN5 879 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 ETNPPLQ8TBG4 499 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 RAD54LQ92698 747 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 PEX13Q92968 403 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 COL26A1Q96A83 441 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 PPP1R36Q96LQ0 422 aa7.25□□□□□ -1.25
NECAP1-213ENST00000638883 TOR3AQ9H497 397 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms