RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 PDZD7Q9H5P4 517 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 PREBQ9HCU5 417 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 POLR3BQ9NW08 1133 aaPredicted RBP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 MEN1O00255 615 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 ZNF185O15231 689 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 LDB2O43679 373 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 MTA2O94776 668 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 OAZ2O95190 189 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 PTMAP06454 111 aaKnown RBP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 MX2P20592 715 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 HOXC8P31273 242 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 PIK3CAP42336 1068 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 AP3M2P53677 418 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 EXOSC10Q01780 885 aaKnown RBP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 ELAVL3Q14576 367 aaKnown RBP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 ZNF234Q14588 700 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 PRKD1Q15139 912 aaPredicted RBP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 PHKG1Q16816 387 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 PFKFB3Q16875 520 aaPredicted RBP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 TFDP3Q5H9I0 405 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 MEI1Q5TIA1 1274 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 DENND2CQ68D51 928 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 GAREM2Q75VX8 874 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 ZNF438Q7Z4V0 828 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 KIAA0907Q7Z7F0 614 aaPredicted RBP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 HORMAD1Q86X24 394 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 DRC7Q8IY82 874 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 OVCA2Q8WZ82 227 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 RMND5BQ96G75 393 aaPredicted RBP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 SPAG5Q96R06 1193 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 FAM213AQ9BRX8 229 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 KCNJ16Q9NPI9 418 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 ABCB8Q9NUT2 735 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 COMMD8Q9NX08 183 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 GGA2Q9UJY4 613 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 ITGA11Q9UKX5 1188 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 HS3ST4Q9Y661 456 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 RPS6KL1Q9Y6S9 549 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 ZNF236Q9UL36 1845 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 SLC7A4O43246 635 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 B4GAT1O43505 415 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 HEXIM1O94992 359 aaKnown RBP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 TDP2O95551 362 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 GOT1P17174 413 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 MAGEA11P43364 429 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 ARCN1P48444 511 aaKnown RBP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 ACY1Q03154 408 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 MBTD1Q05BQ5 628 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 TRA2AQ13595 282 aaKnown RBP eCLIP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 UPP1Q16831 310 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 ZNF394Q53GI3 561 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 OR6B2Q6IFH4 312 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 SHQ1Q6PI26 577 aaKnown RBP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 DNAJB14Q8TBM8 379 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 CYB5D2Q8WUJ1 264 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 SLC5A5Q92911 643 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 PCYT2Q99447 389 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 FERMT1Q9BQL6 677 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 OSBPL7Q9BZF2 842 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 CDH19Q9H159 772 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 TMEM245Q9H330 911 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 DDX19AQ9NUU7 478 aaKnown RBP4.49□□□□□ -1.69
GABRA1-220ENST00000638159 FZD4Q9ULV1 537 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 PPT2Q9UMR5 302 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 DERAQ9Y315 318 aa4.49□□□□□ -1.69
GABRA1-220ENST00000638159 TRIM38O00635 465 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 MID1O15344 667 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 TM7SF2O76062 418 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 GAP43P17677 238 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 RPL13P26373 211 aaKnown RBP4.48□□□□□ -1.69
GABRA1-220ENST00000638159 PEX19P40855 299 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 ACTG1P63261 375 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 SRSF1Q07955 248 aaKnown RBP eCLIP4.48□□□□□ -1.69
GABRA1-220ENST00000638159 STIM1Q13586 685 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 SF3B4Q15427 424 aaKnown RBP eCLIP4.48□□□□□ -1.69
GABRA1-220ENST00000638159 TMEM211Q6ICI0 200 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 TTC23LQ6PF05 361 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 BHLHB9Q6PI77 547 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 Q6ZSR6 202 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 KIAA1958Q8N8K9 716 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 CEP120Q8N960 986 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 AZIN2Q96A70 460 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 C18orf25Q96B23 403 aaPredicted RBP4.48□□□□□ -1.69
GABRA1-220ENST00000638159 BDH2Q9BUT1 245 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 MLPHQ9BV36 600 aaPredicted RBP4.48□□□□□ -1.69
GABRA1-220ENST00000638159 ERVMER34-1Q9H9K5 563 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 STARD5Q9NSY2 213 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 SEL1LQ9UBV2 794 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 BTRCQ9Y297 605 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 TP53TG5Q9Y2B4 290 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 TET1Q8NFU7 2136 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 MYH6P13533 1939 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 MYH8P13535 1937 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 CBX4O00257 560 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 RASGRF2O14827 1237 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 F9P00740 461 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 CYP2A7P20853 494 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 SRP14P37108 136 aaKnown RBP4.48□□□□□ -1.69
GABRA1-220ENST00000638159 MEOX1P50221 254 aa4.48□□□□□ -1.69
GABRA1-220ENST00000638159 RBBP7Q16576 425 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms