RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 LGALS3BPQ08380 585 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 DDR2Q16832 855 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 WASH2PQ6VEQ5 465 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 CD99L2Q8TCZ2 262 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 HERVK_113Q902F9 699 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 BPIFA3Q9BQP9 254 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 KLHL31Q9H511 634 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 PAIP2BQ9ULR5 123 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 IRS2Q9Y4H2 1338 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 NFIBO00712 420 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 CCL16O15467 120 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 CNOT3O75175 753 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 WARSP23381 471 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 PGM1P36871 562 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 FXR2P51116 673 aaKnown RBP eCLIP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 SELENOVP59797 346 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 CXCL9Q07325 125 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 ELP6Q0PNE2 266 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 ATP13A5Q4VNC0 1218 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 TYW3Q6IPR3 259 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 SGMS1Q86VZ5 419 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 DENND1CQ8IV53 801 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 LMAN2LQ9H0V9 348 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 VIPAS39Q9H9C1 493 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 KCTD5Q9NXV2 234 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 BTBD7Q9P203 1132 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 GLS2Q9UI32 602 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 PREX1Q8TCU6 1659 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 USP27XA6NNY8 438 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 KLHL41O60662 606 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 CYP1A1P04798 512 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 SELPP16109 830 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 ADCYAP1R1P41586 468 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 FKBP1AP62942 108 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 KDSRQ06136 332 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 POM121L1PQ3SYA9 428 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 PHF19Q5T6S3 580 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 ACAD10Q6JQN1 1059 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 SH3BP5LQ7L8J4 393 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 JMJD4Q9H9V9 463 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 GPAMQ9HCL2 828 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 A0A1W2PQC6 194 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 ANO9A1A5B4 782 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 AIM2O14862 343 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 SRGNP10124 158 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 BDNFP23560 247 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 MLH1P40692 756 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 DCLRE1AQ6PJP8 1040 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 HSDL2Q6YN16 418 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 SMYD1Q8NB12 490 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 OR14C36Q8NHC7 312 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 AIFM3Q96NN9 605 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 HIST1H2AAQ96QV6 131 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 BCO2Q9BYV7 579 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 ADPRHL2Q9NX46 363 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 CLDND1Q9NY35 253 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 TRHDEQ9UKU6 1024 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 ABCA9Q8IUA7 1624 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 MYH13Q9UKX3 1938 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 SLCO1B7G3V0H7 640 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 ANXA6P08133 673 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 IL12BP29460 328 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 RCVRNP35243 200 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 PEX19P40855 299 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 GLUD2P49448 558 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 MYBPC1Q00872 1141 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 PLOD1Q02809 727 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 AP5B1Q2VPB7 878 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 GPAT3Q53EU6 434 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 AMIGO1Q86WK6 493 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 KIAA2013Q8IYS2 634 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 RTL3Q8N8U3 475 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 E2F7Q96AV8 911 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 TPD52L3Q96J77 140 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 RANBP17Q9H2T7 1088 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 CYLDQ9NQC7 956 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 MTO1Q9Y2Z2 717 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 PTPRJQ12913 1337 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 WNT10BO00744 389 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 CDH16O75309 829 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 EPN2O95208 641 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 CCNYL3P0C7X3 344 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 UBA1P22314 1058 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 OLFML2BQ68BL8 750 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 EDEM1Q92611 657 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 TTPALQ9BTX7 342 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 PRDM16Q9HAZ2 1276 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 NMRAL1Q9HBL8 299 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 MRPL39Q9NYK5 338 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 NOP53Q9NZM5 478 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 AP3M1Q9Y2T2 418 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 TNPO3Q9Y5L0 923 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 PLA2R1Q13018 1463 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 SNUPNO95149 360 aaKnown RBP6.23□□□□□ -1.41
SCN1A-217ENST00000637988 ITPKBP27987 946 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 TGFBR2P37173 567 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 KCNJ5P48544 419 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 PSMD8P48556 350 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 POLE2P56282 527 aa6.23□□□□□ -1.41
SCN1A-217ENST00000637988 RHAGQ02094 409 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms