RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 RBM15BQ8NDT2 890 aaKnown RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 FBXO27Q8NI29 283 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 WDR60Q8WVS4 1066 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 ZNF669Q96BR6 464 aaPredicted RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 MTG1Q9BT17 334 aaPredicted RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 TRIM62Q9BVG3 475 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 IL1RAPL1Q9NZN1 696 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 SOX13Q9UN79 622 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 DNAJC16Q9Y2G8 782 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 B2RBV5 119 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 USP12O75317 370 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 LYPLA1O75608 230 aaPredicted RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 TM7SF2O76062 418 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 LUC7L3O95232 432 aaKnown RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 RPLP2P05387 115 aaKnown RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 ENO1P06733 434 aaKnown RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 ODC1P11926 461 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 NFKB1P19838 968 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 PAX3P23760 479 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 HOXC13P31276 330 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 HTR7P34969 479 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 CPOXP36551 454 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 PGM1P36871 562 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 CLNS1AP54105 237 aaKnown RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 GDF6Q6KF10 455 aaPredicted RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 CD300LGQ6UXG3 332 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 RSPH3Q86UC2 560 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 TRPV1Q8NER1 839 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 PPP1R14CQ8TAE6 165 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 LPPQ93052 612 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 AGAP3Q96P47 875 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 PAAF1Q9BRP4 392 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 ARHGEF38Q9NXL2 777 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 STOML1Q9UBI4 398 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 TDRD15B5MCY1 1934 aaKnown RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 PRR5-ARHGAP8B1AHC4 643 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 SPECC1L-ADORA2AF8WAN1 911 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 G3V2L1 256 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 M0QZQ0 153 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 TIMM44O43615 452 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 CPA3P15088 417 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 HADHAP40939 763 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 SCNN1GP51170 649 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 ALDH18A1P54886 795 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 ABCE1P61221 599 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 IRX4P78413 519 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 ARHGAP8P85298 464 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 CERCAMQ5T4B2 595 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 NET1Q7Z628 596 aaPredicted RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 CTU1Q7Z7A3 348 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 KCNV2Q8TDN2 545 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 EDEM1Q92611 657 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 NUP205Q92621 2012 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 NAF1Q96HR8 494 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 PGLYRP2Q96PD5 576 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 AGAP2Q99490 1192 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 KIFC1Q9BW19 673 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 RHOBTB2Q9BYZ6 727 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 UPF3AQ9H1J1 476 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 STX18Q9P2W9 335 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 GPR182O15218 404 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 PSMD3O43242 534 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 KLHL2O95198 593 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 PSMG1O95456 288 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 RALBP11234 206 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 ACADSP16219 412 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 ATP6V1C1P21283 382 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 IDH3AP50213 366 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 COG7P83436 770 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 UBAP2LQ14157 1087 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 TAF11Q15544 211 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 MANEALQ5VSG8 457 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 CST9Q5W186 159 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 NAPEPLDQ6IQ20 393 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 CMC1Q7Z7K0 106 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 LCA5Q86VQ0 697 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 KCNMB4Q86W47 210 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 CCDC117Q8IWD4 279 aaPredicted RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 PLD6Q8N2A8 252 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 DNAAF3Q8N9W5 541 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 DQX1Q8TE96 717 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 PPP4R1Q8TF05 950 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 MFSD3Q96ES6 412 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 RILPQ96NA2 401 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 DMAP1Q9NPF5 467 aaPredicted RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 NSMCE4AQ9NXX6 385 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 PCDHB12Q9Y5F1 795 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 SNX10Q9Y5X0 201 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 MANSC4A6NHS7 340 aaPredicted RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 CASTOR2A6NHX0 329 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 ARHGAP42A6NI28 874 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 TMEM114B3SHH9 223 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 H0Y3Z8 333 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 H2AFYO75367 372 aaKnown RBP9.62□□□□□ -0.87
PDPN-212ENST00000621990 KRT36O76013 467 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 CCNCP24863 283 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 DNAJB1P25685 340 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 RAB27AP51159 221 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 SLC34A1Q06495 639 aa9.62□□□□□ -0.87
PDPN-212ENST00000621990 CDH17Q12864 832 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms