RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 SMG5Q9UPR3 1016 aaKnown RBP5.21□□□□□ -1.57
MATR3-228ENST00000620916 ENTPD4Q9Y227 616 aa5.21□□□□□ -1.57
MATR3-228ENST00000620916 SLC12A8A0AV02 714 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ZNF623O75123 536 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 NTRK1P04629 796 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 F8A1P23610 371 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 CARSP49589 748 aaKnown RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 ARHGDIAP52565 204 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ARFIP1P53367 373 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 RNF4P78317 190 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 IRX4P78413 519 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 GCNT1Q02742 428 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 DLG1Q12959 904 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 COTL1Q14019 142 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 FASTKD3Q14CZ7 662 aaKnown RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 LTB4RQ15722 352 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 CYB5R4Q7L1T6 521 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 GPBP1Q86WP2 473 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 TAGAPQ8N103 731 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ANKRD13CQ8N6S4 541 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 OR52N1Q8NH53 320 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 RAB3IL1Q8TBN0 382 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 TRPM4Q8TD43 1214 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 BAP1Q92560 729 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 E2F7Q96AV8 911 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ZKSCAN3Q9BRR0 538 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 PAIP1Q9H074 479 aaKnown RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 PRO3102Q9H379 93 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 TRIT1Q9H3H1 467 aaKnown RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 GOLPH3Q9H4A6 298 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 EBF3Q9H4W6 596 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 Q9H521 79 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 CPNE5Q9HCH3 593 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 POLD4Q9HCU8 107 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 SLC35C2Q9NQQ7 365 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.21□□□□□ -1.583e-12■□□□□ 8.4
MATR3-228ENST00000620916 KCND2Q9NZV8 630 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 LIMA1Q9UHB6 759 aaKnown RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 ZNF112Q9UJU3 913 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ERVK-19Q9WJR5 959 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 HYOU1Q9Y4L1 999 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 PTCH2Q9Y6C5 1203 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 MYH7BA7E2Y1 1941 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 GREB1LQ9C091 1923 aaPredicted RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 LOC100653049A0A140TA62 436 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ZSCAN5CA6NGD5 496 aaPredicted RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 LRRC53A6NM62 1247 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ZNF839A8K0R7 811 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 C9IYK1 514 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 F8W036 122 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ERVH48-1M5A8F1 160 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 SGK1O00141 431 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 DYRK3O43781 588 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 LRRN2O75325 713 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 KRT34O76011 436 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 KRT18P05783 430 aaKnown RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 CALB1P05937 261 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 T-ENOLP0DO92 83 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ATF4P18848 351 aaPredicted RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 CCNA2P20248 432 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 EPHB2P29323 1055 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ALDH1A3P47895 512 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 NPTX2P47972 431 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 TPTEP56180 551 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 KCNAB2Q13303 367 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 MTFR1Q15390 333 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 MAPKAPK3Q16644 382 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ARHGAP44Q17R89 818 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 TEX30Q5JUR7 227 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 BEND3Q5T5X7 828 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 SLC6A19Q695T7 634 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ZNF425Q6IV72 752 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 SEZ6L2Q6UXD5 910 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 NSMFQ6X4W1 530 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 SETD3Q86TU7 594 aaPredicted RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 RHPN2Q8IUC4 686 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 RAVER1Q8IY67 606 aaKnown RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 PIK3C3Q8NEB9 887 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 IL17REQ8NFR9 667 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 VANGL1Q8TAA9 524 aaPredicted RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 WDR48Q8TAF3 677 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ZNF461Q8TAF7 563 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ZNF398Q8TD17 642 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 MGARPQ8TDB4 240 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 TRMT2BQ96GJ1 504 aaKnown RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 C7orf34Q96L11 122 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 FRMD6Q96NE9 622 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 ZSCAN5AQ9BUG6 496 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 HTATIP2Q9BUP3 242 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 TSPAN10Q9H1Z9 355 aaPredicted RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 HIPK3Q9H422 1215 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 PRDM8Q9NQV8 689 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 NDE1Q9NXR1 346 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 TRPS1Q9UHF7 1281 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 RAB26Q9ULW5 256 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 SIK3Q9Y2K2 1263 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 REXO2Q9Y3B8 237 aaKnown RBP5.21□□□□□ -1.58
MATR3-228ENST00000620916 AUP1Q9Y679 476 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 FRMPD4Q14CM0 1322 aa5.21□□□□□ -1.58
MATR3-228ENST00000620916 HMX3A6NHT5 357 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms