RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 CPSF7Q8N684 471 aaKnown RBP19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 ZNF669Q96BR6 464 aaPredicted RBP19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 PPP1R36Q96LQ0 422 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 PRPF18Q99633 342 aaKnown RBP19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 NMRAL1Q9HBL8 299 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 ACSS2Q9NR19 701 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 OXSMQ9NWU1 459 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 GALNT8Q9NY28 637 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 HDAC3O15379 428 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 CCR10P46092 362 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 HPCAP84074 193 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 MYBPC3Q14896 1274 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 PAOXQ6QHF9 649 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 PGAM4Q8N0Y7 254 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 OR52K1Q8NGK4 314 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 URGCPQ8TCY9 931 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 SREK1Q8WXA9 508 aaKnown RBP19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 USP13Q92995 863 aaPredicted RBP19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 PPP1R16BQ96T49 567 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 RAP2CQ9Y3L5 183 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 SNX9Q9Y5X1 595 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 SLC22A2O15244 555 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 C2P06681 752 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 FAM58BPP0C7Q3 252 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 PPARGP37231 505 aaPredicted RBP19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 PHKA2P46019 1235 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 SNX16P57768 344 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 ITGA7Q13683 1181 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 CELF3Q5SZQ8 465 aaKnown RBP19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 SEL1L3Q68CR1 1132 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 ADAM32Q8TC27 787 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 CNKSR2Q8WXI2 1034 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 SLC2A11Q9BYW1 496 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 PRDM16Q9HAZ2 1276 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 DDX18Q9NVP1 670 aaKnown RBP19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 IGSF9Q9P2J2 1179 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 BCAP29Q9UHQ4 241 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 FZD10Q9ULW2 581 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 HES2Q9Y543 173 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 GRID2O43424 1007 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 BCAS2O75934 225 aaPredicted RBP19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 HSPA13P48723 471 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 HSP90AA5PQ58FG0 334 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 SETD3Q86TU7 594 aaPredicted RBP19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 ALDH16A1Q8IZ83 802 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 RNF148Q8N7C7 305 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 ACVR1CQ8NER5 493 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 KLHL32Q96NJ5 620 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 LRRC40Q9H9A6 602 aa19.97■□□□□ 0.79
PDLIM3-212ENST00000620787 A0A087WZ62 844 aa19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 ZCWPW2A0A1B0GU75 182 aa19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 CFLARO15519 480 aa19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 C22orf31O95567 290 aa19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 FAM200BP0CF97 657 aa19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 ENO3P13929 434 aaPredicted RBP19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 ARF4P18085 180 aaPredicted RBP19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 RPL14P50914 215 aaKnown RBP19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 BORAQ6PGQ7 559 aa19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 FAM131BQ86XD5 332 aa19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 GALNT4Q8N4A0 578 aa19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 TMEM102Q8N9M5 508 aaPredicted RBP19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 DLG3Q92796 817 aa19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 FDXACB1Q9BRP7 624 aaPredicted RBP19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 DRC3Q9H069 523 aa19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 WDR41Q9HAD4 459 aa19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 RCOR3Q9P2K3 495 aaPredicted RBP19.96■□□□□ 0.79
PDLIM3-212ENST00000620787 STX16-NPEPL1H3BU86 382 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 PPEF2O14830 753 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 LCP1P13796 627 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 DPEP1P16444 411 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 ME2P23368 584 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 NSUN2Q08J23 767 aaKnown RBP eCLIP19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 IFRD2Q12894 506 aaPredicted RBP19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 HERC3Q15034 1050 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 SH2D4BQ5SQS7 431 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 TMEM198Q66K66 360 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 LBX2Q6XYB7 198 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 TMEM135Q86UB9 458 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 DDI1Q8WTU0 396 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 ITFG2Q969R8 447 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 KIF12Q96FN5 646 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 CATSPER2Q96P56 530 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 NUF2Q9BZD4 464 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 ACOT8O14734 319 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 USP12O75317 370 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 PCSK6P29122 969 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 SCNN1AP37088 669 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 STRADAQ7RTN6 431 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 RIOX2Q8IUF8 465 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 CCNYQ8ND76 341 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 PDCD6IPQ8WUM4 868 aaKnown RBP19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 MCMBPQ9BTE3 642 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 MRPL1Q9BYD6 325 aaKnown RBP19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 DPEP3Q9H4B8 488 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 PRDM12Q9H4Q4 367 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 PADI4Q9UM07 663 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 MCM3APO60318 1980 aa19.95■□□□□ 0.78
PDLIM3-212ENST00000620787 SOCS7O14512 581 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 HBP1O60381 514 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms