RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 KREMEN1Q96MU8 473 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 CINPQ9BW66 212 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 TPRKBQ9Y3C4 175 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 BPGMP07738 259 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 CHRNB2P17787 502 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 RPL22P35268 128 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 CSE1LP55060 971 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 RPL26P61254 145 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.11□□□□□ -1.91
LPP-221ENST00000618621 POLD3Q15054 466 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 LAYNQ6UX15 382 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 UNC5AQ6ZN44 842 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 FITM2Q8N6M3 262 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 IMPAD1Q9NX62 359 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 DCXO43602 365 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 B3GAT3O94766 335 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ATXN3P54252 364 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 GRSF1Q12849 480 aaKnown RBP eCLIP3.11□□□□□ -1.91
LPP-221ENST00000618621 DSELQ8IZU8 1212 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 RORBQ92753 470 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 FAXDC2Q96IV6 333 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 MAGEB10Q96LZ2 347 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 ZNF512Q96ME7 567 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 PRKD2Q9BZL6 878 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 REXO4Q9GZR2 422 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 KLHL25Q9H0H3 589 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 CHST7Q9NS84 486 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SLC30A1Q9Y6M5 507 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PBRM1Q86U86 1689 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 H3BNX3 289 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 RNF103O00237 685 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 IFRD1O00458 451 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 SPATA31C1P0DKV0 1188 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ADRA1DP25100 572 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 RPL9P32969 192 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 BCAT1P54687 386 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PDK3Q15120 406 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PDZK1Q5T2W1 519 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 C12orf56Q8IXR9 622 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 CLYBLQ8N0X4 340 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 TMEM161BQ8NDZ6 487 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 TXLNGYQ9BZA5 131 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 KCNMB3Q9NPA1 279 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 FBXO28Q9NVF7 368 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 TMEM161AQ9NX61 479 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 MKS1Q9NXB0 559 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 UBA2Q9UBT2 640 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 ANAPC2Q9UJX6 822 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SQORQ9Y6N5 450 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 TULP4Q9NRJ4 1543 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 E2F8A0AVK6 867 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SRP72O76094 671 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 MTA2O94776 668 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 HSD3B1P14060 373 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 VAV1P15498 845 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 CAP2P40123 477 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 CCNFP41002 786 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 VAC14Q08AM6 782 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 DGKZQ13574 1117 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PCBP1Q15365 356 aaKnown RBP eCLIP3.11□□□□□ -1.91
LPP-221ENST00000618621 PCID2Q5JVF3 399 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SLC30A10Q6XR72 485 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 TMEM26Q6ZUK4 368 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SETD9Q8NE22 299 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 STAG3L4Q8TBR4 150 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 AGR3Q8TD06 166 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 MUC3BQ9H195 1237 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PPP2R3BQ9Y5P8 575 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 LMTK2Q8IWU2 1503 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PNMA8CA0A1B0GUJ8 204 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 WBP4O75554 376 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 GLP2RO95838 553 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 NCAM1P13591 858 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 AMPD1P23109 780 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PIK3R1P27986 724 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ADSSP30520 456 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ADSLP30566 484 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 NCKAP1LP55160 1127 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PPP3CAQ08209 521 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 HERC6Q8IVU3 1022 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 LNX1Q8TBB1 728 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 LRRC15Q8TF66 581 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 FCGR1BQ92637 280 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SGF29Q96ES7 293 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 VPS50Q96JG6 964 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ZNF570Q96NI8 536 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 HOPXQ9BPY8 73 aaPredicted RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 MTFR1LQ9H019 292 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 FANCEQ9HB96 536 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 LATS2Q9NRM7 1088 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PRPF19Q9UMS4 504 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 TBC1D30Q9Y2I9 924 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 LAMC1P11047 1609 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ERI2A8K979 691 aaKnown RBP3.11□□□□□ -1.91
LPP-221ENST00000618621 FOXO6A8MYZ6 492 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 H3BMM5 538 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ZNF24P17028 368 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 ALOX12P18054 663 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 NME5P56597 212 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 CYP4X1Q8N118 509 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms