RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 IMPG1Q17R60 797 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 ARMCX4Q5H9R4 360 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 SPANXN2Q5MJ10 180 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 DHRS4L2Q6PKH6 230 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 EFL1Q7Z2Z2 1120 aaKnown RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 HDDC2Q7Z4H3 204 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 KBTBD6Q86V97 674 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 CPNE8Q86YQ8 564 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 SHCBP1Q8NEM2 672 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 BEST2Q8NFU1 509 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 LILRB1Q8NHL6 650 aaPredicted RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 SHKBP1Q8TBC3 707 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 ACSF2Q96CM8 615 aaPredicted RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 MBOAT7Q96N66 472 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 LENG8Q96PV6 779 aaPredicted RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 CCDC106Q9BWC9 280 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 PARVAQ9NVD7 372 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 POLR3BQ9NW08 1133 aaPredicted RBP7.53□□□□□ -1.2
PDE6A-205ENST00000617647 GTSE1Q9NYZ3 720 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 DNPEPQ9ULA0 475 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 SHOC2Q9UQ13 582 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 SESN1Q9Y6P5 492 aa7.53□□□□□ -1.2
PDE6A-205ENST00000617647 TRPC5OSA6NMA1 111 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 ZBTB5O15062 677 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 SGPL1O95470 568 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 CD4P01730 458 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 IL1R1P14778 569 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 PTPN1P18031 435 aaKnown RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 SCNN1DP51172 638 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 PUM3Q15397 648 aaKnown RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 KIF19Q2TAC6 998 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 RABL6Q3YEC7 729 aaPredicted RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 CDONQ4KMG0 1287 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 HAUS6Q7Z4H7 955 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 VANGL1Q8TAA9 524 aaPredicted RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 PTCD2Q8WV60 388 aaKnown RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 SAV1Q9H4B6 383 aaPredicted RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 ACSS3Q9H6R3 686 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 SSU72Q9NP77 194 aaKnown RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 KCNQ5Q9NR82 932 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 TMCC3Q9ULS5 477 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 SLIT1O75093 1534 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 CLRN2A0PK11 232 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 SAGE2PA6NJ88 616 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 KBTBD13C9JR72 458 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 PDXKO00764 312 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 TLR3O15455 904 aaKnown RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 HOXC11O43248 304 aaPredicted RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 HTRA2O43464 458 aaPredicted RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 VAPBO95292 243 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 ALAS1P13196 640 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 POLR2BP30876 1174 aaKnown RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 OR3A3P47888 321 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 ACOT2P49753 483 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 ABATP80404 500 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 BNC1Q01954 994 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 PUDPQ08623 228 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 WDR44Q5JSH3 913 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 COLEC12Q5KU26 742 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 KRT39Q6A163 491 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 TAF2Q6P1X5 1199 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 ARCQ7LC44 396 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 SLC51BQ86UW2 128 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 SH3YL1Q96HL8 342 aaPredicted RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 SERAC1Q96JX3 654 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 NT5C1BQ96P26 610 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 RSPH9Q9H1X1 276 aaPredicted RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 SERHL2Q9H4I8 314 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 KCNK13Q9HB14 408 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 RGS17Q9UGC6 210 aaPredicted RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 STOML2Q9UJZ1 356 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 CDYLQ9Y232 598 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 RGSL1A5PLK6 1076 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 E5RJQ4 531 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 ZNF701M0R085 212 aaPredicted RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 TRIM38O00635 465 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 POLR1CO15160 346 aaPredicted RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 SERPINE1P05121 402 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 PIK3R1P27986 724 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 RPL35P42766 123 aaKnown RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 ALDH3B2P48448 385 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 ZNF132P52740 706 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 NFX1Q12986 1120 aaKnown RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 MAPRE2Q15555 327 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 EPC2Q52LR7 807 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 N4BP2L1Q5TBK1 243 aaPredicted RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 FAM205BPQ63HN1 556 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 RAP1GAP2Q684P5 730 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 DENND5AQ6IQ26 1287 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 RAB43Q86YS6 212 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 PJA1Q8NG27 643 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 CPA5Q8WXQ8 436 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 PHF21AQ96BD5 680 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 ZHX1-C8orf76Q96EF9 292 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 ASIC4Q96FT7 647 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 TBCBQ99426 244 aa7.52□□□□□ -1.21
PDE6A-205ENST00000617647 THG1LQ9NWX6 298 aaKnown RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 ABI2Q9NYB9 513 aaPredicted RBP7.52□□□□□ -1.21
PDE6A-205ENST00000617647 SCAF8Q9UPN6 1271 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms