RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 RBBP6Q7Z6E9 1792 aaKnown RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 FZD9O00144 591 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 TMCC2O75069 709 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 RNASEH2AO75792 299 aaKnown RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 ZMPSTE24O75844 475 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 RGS20O76081 388 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 SGPL1O95470 568 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 ETS1P14921 441 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 XRCC1P18887 633 aaPredicted RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 GRK2P25098 689 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 NKX2-5P52952 324 aaPredicted RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 TMBIM6P55061 237 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 HSPA14Q0VDF9 509 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 INAVAQ3KP66 663 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 SWSAP1Q6NVH7 229 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 FAM117BQ6P1L5 589 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 DRICH1Q6PGQ1 229 aaPredicted RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 EPS8L1Q8TE68 723 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 C2orf49Q9BVC5 232 aaPredicted RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 B3GNT4Q9C0J1 378 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 C12orf10Q9HB07 376 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 AVENQ9NQS1 362 aaPredicted RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 TOPORSQ9NS56 1045 aaPredicted RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 GINM1Q9NU53 330 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 VPS28Q9UK41 221 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 PACSIN3Q9UKS6 424 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 DNPEPQ9ULA0 475 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 TRIM64A6NGJ6 449 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 HOXC11O43248 304 aaPredicted RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 NCF2P19878 526 aaPredicted RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 STX1BP61266 288 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 OCA2Q04671 838 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 PPP3CAQ08209 521 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 MAPRE1Q15691 268 aaKnown RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 BNC2Q6ZN30 1099 aaPredicted RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 RHPN2Q8IUC4 686 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 BSNDQ8WZ55 320 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 SH3YL1Q96HL8 342 aaPredicted RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 TXNDC15Q96J42 360 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 TRIT1Q9H3H1 467 aaKnown RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 POLR1BQ9H9Y6 1135 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 NEK6Q9HC98 313 aa11.79□□□□□ -0.52
TP53-222ENST00000617185 SUCOQ9UBS9 1254 aaKnown RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 NOCTQ9UK39 431 aaKnown RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 ZNF214Q9UL59 606 aaPredicted RBP11.79□□□□□ -0.52
TP53-222ENST00000617185 ADM5C9JUS6 153 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 TAF4O00268 1085 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 CYB561D2O14569 222 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 EIF3DO15371 548 aaKnown RBP eCLIP11.78□□□□□ -0.52
TP53-222ENST00000617185 HTRA2O43464 458 aaPredicted RBP11.78□□□□□ -0.52
TP53-222ENST00000617185 FAM155BO75949 473 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 BPGMP07738 259 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 TREML2Q5T2D2 321 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 SLC51BQ86UW2 128 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 CBWD2Q8IUF1 395 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 RASSF5Q8WWW0 418 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 DCPSQ96C86 337 aaKnown RBP11.78□□□□□ -0.52
TP53-222ENST00000617185 CEP170P1Q96L14 293 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 TUBA1CQ9BQE3 449 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 DHX33Q9H6R0 707 aaKnown RBP11.78□□□□□ -0.52
TP53-222ENST00000617185 DNAJC28Q9NX36 388 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 DNMT3BQ9UBC3 853 aaKnown RBP11.78□□□□□ -0.52
TP53-222ENST00000617185 ZMAT5Q9UDW3 170 aaKnown RBP11.78□□□□□ -0.52
TP53-222ENST00000617185 POLR2AP24928 1970 aaKnown RBP11.78□□□□□ -0.52
TP53-222ENST00000617185 CROCCQ5TZA2 2017 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 AP3B1O00203 1094 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 PLOD2O00469 737 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 ASNA1O43681 348 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 BCAS2O75934 225 aaPredicted RBP11.78□□□□□ -0.52
TP53-222ENST00000617185 DDHD2O94830 711 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 OPRL1P41146 370 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 PRAMEP78395 509 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 BFSP1Q12934 665 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 PCSK7Q16549 785 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 NFIL3Q16649 462 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 PIGGQ5H8A4 983 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 FNBP1LQ5T0N5 605 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 TTC39BQ5VTQ0 682 aaPredicted RBP11.78□□□□□ -0.52
TP53-222ENST00000617185 PLEKHG7Q6ZR37 379 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 ARHGEF19Q8IW93 802 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 TTC30BQ8N4P2 665 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 LMO3Q8TAP4 145 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 ZC3H15Q8WU90 426 aaKnown RBP11.78□□□□□ -0.52
TP53-222ENST00000617185 CDRT15Q96T59 188 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 COQ7Q99807 217 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 VPS33BQ9H267 617 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 VRTNQ9H8Y1 702 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 SCUBE2Q9NQ36 999 aa11.78□□□□□ -0.52
TP53-222ENST00000617185 NXF1Q9UBU9 619 aaKnown RBP11.78□□□□□ -0.52
TP53-222ENST00000617185 DRG1Q9Y295 367 aaKnown RBP11.78□□□□□ -0.52
TP53-222ENST00000617185 PSTPIP1O43586 416 aa11.77□□□□□ -0.52
TP53-222ENST00000617185 RPL10P27635 214 aaKnown RBP11.77□□□□□ -0.52
TP53-222ENST00000617185 EEF1DP29692 281 aaKnown RBP11.77□□□□□ -0.52
TP53-222ENST00000617185 SERPINB1P30740 379 aa11.77□□□□□ -0.52
TP53-222ENST00000617185 FMO1Q01740 532 aa11.77□□□□□ -0.52
TP53-222ENST00000617185 SP2Q02086 613 aa11.77□□□□□ -0.52
TP53-222ENST00000617185 DNASE1L3Q13609 305 aa11.77□□□□□ -0.52
TP53-222ENST00000617185 ALCAMQ13740 583 aa11.77□□□□□ -0.52
TP53-222ENST00000617185 TUBA3CQ13748 450 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms