RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 MYO6Q9UM54 1294 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 SIK3Q9Y2K2 1263 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 TLR4O00206 839 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 CCDC175P0C221 793 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 RXRGP48443 463 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 PSEN1P49768 467 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 AP3M2P53677 418 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 GABREP78334 506 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 E2F1Q01094 437 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 COLEC12Q5KU26 742 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 KIAA1614Q5VZ46 1190 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 FAM217AQ8IXS0 508 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 CCDC170Q8IYT3 715 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 WFIKKN2Q8TEU8 576 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 SYN2Q92777 582 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 SLC35C1Q96A29 364 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 FAM81BQ96LP2 452 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 SPAG5Q96R06 1193 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 RSPH9Q9H1X1 276 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 ABCB8Q9NUT2 735 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 CLIC5Q9NZA1 410 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 UBR5O95071 2799 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 DXOO77932 396 aaKnown RBP18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 FMO5P49326 533 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 KIF11P52732 1056 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 KRT83P78385 493 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 CDK17Q00537 523 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 MPPE1Q53F39 396 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 LSMEM2Q8N112 164 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 SERAC1Q96JX3 654 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 CDK5RAP1Q96SZ6 601 aaKnown RBP18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 DPH1Q9BZG8 443 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 NEUROG2Q9H2A3 272 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 DEF6Q9H4E7 631 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 ERVMER34-1Q9H9K5 563 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 PNPLA8Q9NP80 782 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 SPTLC3Q9NUV7 552 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 MARCH2Q9P0N8 246 aa18.22■□□□□ 0.51
TRAPPC3-209ENST00000616395 PTPN13Q12923 2485 aa18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 A0A1W2PP55 124 aa18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 SLC12A8A0AV02 714 aa18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 LRRC72A6NJI9 287 aa18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 ASS1P00966 412 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 DLDP09622 509 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 FECHP22830 423 aa18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 ERVPABLB-1P60509 514 aa18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 PDE4CQ08493 712 aa18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 SPATS2Q86XZ4 545 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 OXR1Q8N573 874 aa18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 OR2T34Q8NGX1 318 aa18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 APOBEC3GQ9HC16 384 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 SUN2Q9UH99 717 aa18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 GGA2Q9UJY4 613 aa18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 SCML1Q9UN30 329 aa18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 BZW2Q9Y6E2 419 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-209ENST00000616395 C10orf142B7Z368 130 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 TRIM38O00635 465 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 PMM2O15305 246 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 SIGLEC6O43699 453 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 SDC3O75056 442 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 USP12O75317 370 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 RNASEH2AO75792 299 aaKnown RBP18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 PABPC1P11940 636 aaKnown RBP18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 ASPAP45381 313 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 LSSP48449 732 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 CCR5P51681 352 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 NFATC3Q12968 1075 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 MBLAC2Q68D91 279 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 RRAGAQ7L523 313 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 KIAA0907Q7Z7F0 614 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 VPS36Q86VN1 386 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 UNC93AQ86WB7 457 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 AHI1Q8N157 1196 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 CCAR2Q8N163 923 aaKnown RBP18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 SEMA4DQ92854 862 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 CCDC42Q96M95 316 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 TTYH3Q9C0H2 523 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 TMEM8AQ9HCN3 771 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 ASCL3Q9NQ33 180 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 STRIP2Q9ULQ0 834 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 SSUH2Q9Y2M2 353 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 HEMK1Q9Y5R4 338 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 USP3Q9Y6I4 520 aa18.2■□□□□ 0.5
TRAPPC3-209ENST00000616395 K7ENP7 123 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 MID1O15344 667 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 ATP5BP06576 529 aaKnown RBP18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 MXI1P50539 228 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 SPA17Q15506 151 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 SGSM1Q2NKQ1 1148 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 CBWD6Q4V339 395 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 SLC45A4Q5BKX6 768 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 CBWD3Q5JTY5 395 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 CBWD5Q5RIA9 395 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 CDCP2Q5VXM1 449 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 INO80CQ6PI98 192 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 CYFIP2Q96F07 1278 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 VCPIP1Q96JH7 1222 aa18.19■□□□□ 0.5
TRAPPC3-209ENST00000616395 TWNKQ96RR1 684 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms