RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 ZBTB40Q9NUA8 1239 aa2.89□□□□□ -1.95
HMGB1P24-202ENST00000615653 TMCC3Q9ULS5 477 aa2.89□□□□□ -1.95
HMGB1P24-202ENST00000615653 DTNAQ9Y4J8 743 aa2.89□□□□□ -1.95
HMGB1P24-202ENST00000615653 CEP83Q9Y592 693 aa2.89□□□□□ -1.95
HMGB1P24-202ENST00000615653 LRRFIP2Q9Y608 721 aaKnown RBP2.89□□□□□ -1.95
HMGB1P24-202ENST00000615653 SQORQ9Y6N5 450 aa2.89□□□□□ -1.95
HMGB1P24-202ENST00000615653 CKAP5Q14008 2032 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 TRBV5-3A0A0A0MS03 114 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 ANKRD18BA2A2Z9 1011 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 A6NCN8 305 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 CD8B2A6NJW9 211 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 J3KTA2 159 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 PODXLO00592 558 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 ZC3H11AO75152 810 aaKnown RBP eCLIP2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 BAIAP3O94812 1187 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 SYF2O95926 243 aaKnown RBP2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 CRYABP02511 175 aaKnown RBP2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 ALDOAP04075 364 aaKnown RBP2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 ITGA5P08648 1049 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 SRGAP2BP0DMP2 458 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 TGFB3P10600 412 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 TGM2P21980 687 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 PSMA3P25788 255 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 KRT9P35527 623 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 ANP32AP39687 249 aaKnown RBP2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 TSPAN7P41732 249 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 STAT6P42226 847 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 ZBED6P86452 979 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 TRIM29Q14134 588 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 PLCB4Q15147 1175 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 INPP5JQ15735 1006 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 ANXA2RQ3ZCQ2 193 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 INTS11Q5TA45 600 aaKnown RBP2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 LIPMQ5VYY2 423 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 WDR93Q6P2C0 686 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 CPLX2Q6PUV4 134 aaKnown RBP2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 ZNF474Q6S9Z5 364 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 TMCO3Q6UWJ1 677 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 LRIG3Q6UXM1 1119 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 SNX32Q86XE0 403 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 RHPN2Q8IUC4 686 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 GLIS1Q8NBF1 620 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 OR52N4Q8NGI2 321 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 TBC1D31Q96DN5 1066 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 RIPOR3Q96MK2 946 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 SEC62Q99442 399 aaKnown RBP2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 EIF2AK1Q9BQI3 630 aaKnown RBP2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 NAA15Q9BXJ9 866 aaKnown RBP2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 SLC26A6Q9BXS9 759 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 STK33Q9BYT3 514 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 TBC1D22BQ9NU19 505 aa2.88□□□□□ -1.95
HMGB1P24-202ENST00000615653 EVPLQ92817 2033 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 KIR2DS5A0A0G2JLQ3 304 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 PNMA6EA0A0J9YXQ4 647 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 ZNF814B7Z6K7 855 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 KIR2DS3K7RE56 304 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 CPLX1O14810 134 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 SPTLC2O15270 562 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 NCK2O43639 380 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 PPP6R2O75170 966 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 EPN2O95208 641 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 NTSR2O95665 410 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 IFIT1P09914 478 aaKnown RBP2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 ALADP13716 330 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 KIF5BP33176 963 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 KRT20P35900 424 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 KCNJ4P48050 445 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 AGTR2P50052 363 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 SNX16P57768 344 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 KRT83P78385 493 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 TLE3Q04726 772 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 PPFIA1Q13136 1202 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 RAB30Q15771 203 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 CCNG2Q16589 344 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 MANEAQ5SRI9 462 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 UBAP2Q5T6F2 1119 aaKnown RBP2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 MFSD4BQ5TF39 518 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 SPATA1Q5VX52 437 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 FAM180BQ6P0A1 224 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 MSANTD2Q6P1R3 559 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 TMEM88Q6PEY1 159 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 DHRS13Q6UX07 377 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 C16orf89Q6UX73 402 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 SLC39A5Q6ZMH5 540 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 LDHAL6AQ6ZMR3 332 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 CCDC73Q6ZRK6 1079 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 C1orf122Q6ZSJ8 110 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 RFX8Q6ZV50 586 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 BRINP3Q76B58 766 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 FASTKD5Q7L8L6 764 aaKnown RBP2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 TMPRSS12Q86WS5 348 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 ERC1Q8IUD2 1116 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 BRSK2Q8IWQ3 736 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 DDIASQ8IXT1 998 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 PAQR4Q8N4S7 273 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 NKAIN3Q8N8D7 197 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 ARL10Q8N8L6 244 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 WDR60Q8WVS4 1066 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 NPIPB3Q92617 1050 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 CENPIQ92674 756 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms