RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 SLC39A13Q96H72 371 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 DEPDC7Q96QD5 511 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 SCAND2PQ9GZW5 306 aaPredicted RBP16.3■□□□□ 0.2
HDDC2-210ENST00000609574 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.3■□□□□ 0.2
HDDC2-210ENST00000609574 COL5A1P20908 1838 aaPredicted RBP16.3■□□□□ 0.2
HDDC2-210ENST00000609574 FAM237AA0A1B0GTK4 181 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 A0A1W2PQ27 194 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 A0A1W2PQ64 194 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 NEMP2A6NFY4 417 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 PLRG1O43660 514 aaKnown RBP16.29■□□□□ 0.2
HDDC2-210ENST00000609574 SIGLEC6O43699 453 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 SDC3O75056 442 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 RTN2O75298 545 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 C1QL1O75973 258 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 SMC2O95347 1197 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 PDGFRAP16234 1089 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 STK19P49842 368 aaPredicted RBP16.29■□□□□ 0.2
HDDC2-210ENST00000609574 TMPRSS3P57727 454 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 PPP2CBP62714 309 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 PPP2CAP67775 309 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 RHDQ02161 417 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 MTA1Q13330 715 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 STIM1Q13586 685 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 PROX2Q3B8N5 592 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 ZC3H12AQ5D1E8 599 aaKnown RBP16.29■□□□□ 0.2
HDDC2-210ENST00000609574 BEND5Q7L4P6 421 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 ERCC4Q92889 916 aaPredicted RBP16.29■□□□□ 0.2
HDDC2-210ENST00000609574 CCDC114Q96M63 670 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 PREBQ9HCU5 417 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 DYRK4Q9NR20 520 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 TMEM131Q92545 1883 aa16.29■□□□□ 0.2
HDDC2-210ENST00000609574 J3QKU1 62 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 ALOX15BO15296 676 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 MED7O43513 233 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 THEGLP0DJG4 465 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 AKT2P31751 481 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 DRD3P35462 400 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 PRCPP42785 496 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 FMO5P49326 533 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 LRRC63Q05C16 580 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 NEK5Q6P3R8 708 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 TAC4Q86UU9 113 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 CCAR2Q8N163 923 aaKnown RBP16.28■□□□□ 0.2
HDDC2-210ENST00000609574 UBR7Q8N806 425 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 MYEOVQ96EZ4 313 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 NAF1Q96HR8 494 aaKnown RBP16.28■□□□□ 0.2
HDDC2-210ENST00000609574 POPDC2Q9HBU9 364 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 KLHL11Q9NVR0 708 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 ARHGAP20Q9P2F6 1191 aa16.28■□□□□ 0.2
HDDC2-210ENST00000609574 SHROOM3Q8TF72 1996 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.27■□□□□ 0.2
HDDC2-210ENST00000609574 A0A1B0GVM2 712 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 TCAF2A6NFQ2 919 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 KCNU1A8MYU2 1149 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 TRIM38O00635 465 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 SLC31A1O15431 190 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 BNIP3LO60238 219 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 GABBR2O75899 941 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 TRUB2O95900 331 aaKnown RBP16.27■□□□□ 0.2
HDDC2-210ENST00000609574 PLK1P53350 603 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 YWHAZP63104 245 aaKnown RBP16.27■□□□□ 0.2
HDDC2-210ENST00000609574 CDK17Q00537 523 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 CNTN1Q12860 1018 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 ZNF177Q13360 481 aaPredicted RBP16.27■□□□□ 0.2
HDDC2-210ENST00000609574 PKP1Q13835 747 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 POM121L1PQ3SYA9 428 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 CCDC40Q4G0X9 1142 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 ZNF658Q5TYW1 1059 aaPredicted RBP16.27■□□□□ 0.2
HDDC2-210ENST00000609574 ANKRD40Q6AI12 368 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 KANSL1Q7Z3B3 1105 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 TMC6Q7Z403 805 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 OR4C6Q8NH72 309 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 SLC35C1Q96A29 364 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 WBP1Q96G27 269 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 FAM204AQ9H8W3 233 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 USP29Q9HBJ7 922 aa16.27■□□□□ 0.2
HDDC2-210ENST00000609574 HOOK1Q9UJC3 728 aaKnown RBP16.27■□□□□ 0.2
HDDC2-210ENST00000609574 KALRNO60229 2985 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 C10orf142B7Z368 130 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 RNF225M0QZC1 329 aaPredicted RBP16.26■□□□□ 0.19
HDDC2-210ENST00000609574 MCF2LO15068 1137 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 FFAR2O15552 330 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 FYNP06241 537 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 KRT5P13647 590 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 VAV1P15498 845 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 DGKAP23743 735 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 CCR1P32246 355 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 VASPP50552 380 aaPredicted RBP16.26■□□□□ 0.19
HDDC2-210ENST00000609574 GABREP78334 506 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 KCNMA1Q12791 1236 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 DLG2Q15700 870 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 ERICH1Q86X53 443 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 FAM174AQ8TBP5 190 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 STK32AQ8WU08 396 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 FRS2Q8WU20 508 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 KCNE4Q8WWG9 221 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 RPRD1AQ96P16 312 aaPredicted RBP16.26■□□□□ 0.19
HDDC2-210ENST00000609574 GSDMAQ96QA5 445 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 DUSP23Q9BVJ7 150 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 DPH1Q9BZG8 443 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms