RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 PPP6R3Q5H9R7 873 aaPredicted RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 IFIT1BQ5T764 474 aaKnown RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 GPR141Q7Z602 305 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 RALGPS2Q86X27 583 aaPredicted RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 PIK3C3Q8NEB9 887 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 FLAD1Q8NFF5 587 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 THAP3Q8WTV1 239 aaPredicted RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 TSPEARQ8WU66 669 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 CHPT1Q8WUD6 406 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 IP6K1Q92551 441 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 HDAC11Q96DB2 347 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 C18orf8Q96DM3 657 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 SHDQ96IW2 340 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 LPIN3Q9BQK8 851 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 NTMT1Q9BV86 223 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 IFIH1Q9BYX4 1025 aaKnown RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 TLE6Q9H808 572 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 UCKL1Q9NWZ5 548 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 PPP1R14DQ9NXH3 145 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 MYH11P35749 1972 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 LTN1O94822 1766 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 FADS2P1A8MWK0 482 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 PSMD11O00231 422 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 EFSO43281 561 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 RAD51CO43502 376 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 TLR2O60603 784 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 DDAH1O94760 285 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 CAMTA2O94983 1202 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 TFAP2AP05549 437 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 CHRM5P08912 532 aaPredicted RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 PRR35P0CG20 571 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 LPOP22079 712 aaPredicted RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 PTBP1P26599 531 aaKnown RBP eCLIP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 AXLP30530 894 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 CIITAP33076 1130 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 PSMC2P35998 433 aaKnown RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 EIF1AXP47813 144 aaKnown RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 PITPNBP48739 271 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 METAP1P53582 386 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 C21orf59P57076 290 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 NUP107P57740 925 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 GNG2P59768 71 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 DSC2Q02487 901 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 ACVR2BQ13705 512 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 COL9A3Q14050 684 aaPredicted RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 STARD3Q14849 445 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 PDK3Q15120 406 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 METTL2BQ6P1Q9 378 aaKnown RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 C6orf15Q6UXA7 325 aaPredicted RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 TMC5Q6UXY8 1006 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 TOM1L2Q6ZVM7 507 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 NET1Q7Z628 596 aaPredicted RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 CCNYL1Q8N7R7 359 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 ZNF248Q8NDW4 579 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 PSD4Q8NDX1 1056 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 SHCBP1Q8NEM2 672 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 RASGRP4Q8TDF6 673 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 TRIM43Q96BQ3 446 aaPredicted RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 TMA16Q96EY4 203 aaKnown RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 PLEKHA8Q96JA3 519 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 MS4A14Q96JA4 679 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 OLFM1Q99784 485 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 FRMD8Q9BZ67 464 aaPredicted RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 ZNF518BQ9C0D4 1074 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 TFB2MQ9H5Q4 396 aaKnown RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 SP140LQ9H930 580 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 MRM3Q9HC36 420 aaKnown RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 SPON1Q9HCB6 807 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 SARS2Q9NP81 518 aaKnown RBP4.83□□□□□ -1.64
LINC01109-201ENST00000603837 SACM1LQ9NTJ5 587 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 GJB4Q9NTQ9 266 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 NDE1Q9NXR1 346 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 NCKIPSDQ9NZQ3 722 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 MARK1Q9P0L2 795 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 ACTR3BQ9P1U1 418 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 RNF14Q9UBS8 474 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 SLC8A2Q9UPR5 921 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 STXBP5LQ9Y2K9 1186 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 DUSP10Q9Y6W6 482 aa4.83□□□□□ -1.64
LINC01109-201ENST00000603837 A0A087WZG4 1122 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 IQANK1A0A1B0GTG1 560 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 OR5K4A6NMS3 321 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 TRIM38O00635 465 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 TXNDC9O14530 226 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 RGS13O14921 159 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 CLOCKO15516 846 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 MOCS3O95396 460 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 PRKCAP17252 672 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 CD33P20138 364 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 CXCR2P25025 360 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 CTBSQ01459 385 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 PEX6Q13608 980 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 HNRNPDQ14103 355 aaKnown RBP4.82□□□□□ -1.64
LINC01109-201ENST00000603837 KRT81Q14533 505 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 HERC3Q15034 1050 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 PON2Q15165 354 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 NPTX1Q15818 432 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 SLC10A6Q3KNW5 377 aa4.82□□□□□ -1.64
LINC01109-201ENST00000603837 LRIT3Q3SXY7 679 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms