RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	TBC1D3G	Q6DHY5	549 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	TBC1D3C	Q6IPX1	549 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	CXorf57	Q6NSI4	855 aa	Known RBP	18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	TAC4	Q86UU9	113 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	TBC1D3	Q8IZP1	549 aa	Predicted RBP	18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	CCDC47	Q96A33	483 aa	Known RBP	18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	SEMA4C	Q9C0C4	833 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	GPR27	Q9NS67	375 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	PPM1H	Q9ULR3	514 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190		U3KQA8	63 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	CETN3	O15182	167 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	RTN2	O75298	545 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	IL1B	P01584	269 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	GP1BA	P07359	652 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	DGKA	P23743	735 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	SYK	P43405	635 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	LSS	P48449	732 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	NDUFA8	P51970	172 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	TMPRSS3	P57727	454 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	SULT2A1	Q06520	285 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	LSMEM2	Q8N112	164 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	LGMN	Q99538	433 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	PREB	Q9HCU5	417 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	KLHL11	Q9NVR0	708 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	TJP2	Q9UDY2	1190 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	NAALADL1	Q9UQQ1	740 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	HECTD1	Q9ULT8	2610 aa		18.86	■□□□□ 0.61
IRF3-231	ENST00000602190	OPA1	O60313	960 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	SDC3	O75056	442 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	TACR2	P21452	398 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	GPD2	P43304	727 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	MEA1	Q16626	185 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	SYPL2	Q5VXT5	272 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	KDM7A	Q6ZMT4	941 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	KRBA2	Q6ZNG9	492 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	LGI2	Q8N0V4	545 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	FAM181A	Q8N9Y4	354 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	LMO3	Q8TAP4	145 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	IFT43	Q96FT9	208 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	BTN2A3P	Q96KV6	586 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	UCKL1	Q9NWZ5	548 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190	OR51B4	Q9Y5P0	310 aa		18.85	■□□□□ 0.61
IRF3-231	ENST00000602190		A0A1B0GVM2	712 aa		18.84	■□□□□ 0.61
IRF3-231	ENST00000602190	PIK3R2	O00459	728 aa		18.84	■□□□□ 0.61
IRF3-231	ENST00000602190	MCF2L	O15068	1137 aa		18.84	■□□□□ 0.61
IRF3-231	ENST00000602190	SART1	O43290	800 aa	Known RBP	18.84	■□□□□ 0.61
IRF3-231	ENST00000602190	PIAS2	O75928	621 aa		18.84	■□□□□ 0.61
IRF3-231	ENST00000602190	CNTN1	Q12860	1018 aa		18.84	■□□□□ 0.61
IRF3-231	ENST00000602190	SETMAR	Q53H47	684 aa	Predicted RBP	18.84	■□□□□ 0.61
IRF3-231	ENST00000602190	RNF219	Q5W0B1	726 aa	Predicted RBP	18.84	■□□□□ 0.61
IRF3-231	ENST00000602190	NEK5	Q6P3R8	708 aa		18.84	■□□□□ 0.61
IRF3-231	ENST00000602190	TMEM270	Q6UE05	265 aa		18.84	■□□□□ 0.61
IRF3-231	ENST00000602190	CCAR2	Q8N163	923 aa	Known RBP	18.84	■□□□□ 0.61
IRF3-231	ENST00000602190	ERCC4	Q92889	916 aa	Predicted RBP	18.84	■□□□□ 0.61
IRF3-231	ENST00000602190	CNTN6	Q9UQ52	1028 aa		18.84	■□□□□ 0.61
IRF3-231	ENST00000602190		A0A1W2PNU3	283 aa	Predicted RBP	18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	TCAF2	A6NFQ2	919 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	KCNU1	A8MYU2	1149 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190		M0QYV0	167 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	BRD2	P25440	801 aa	Known RBP	18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	MAT2A	P31153	395 aa	Known RBP	18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	NNMT	P40261	264 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	KCNMA1	Q12791	1236 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	STAT4	Q14765	748 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	PIP5KL1	Q5T9C9	394 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	TTC39B	Q5VTQ0	682 aa	Predicted RBP	18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	FAM46C	Q5VWP2	391 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	RAP1GAP2	Q684P5	730 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	ABI3BP	Q7Z7G0	1075 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	DSG4	Q86SJ6	1040 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	CCDC117	Q8IWD4	279 aa	Predicted RBP	18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	SMYD4	Q8IYR2	804 aa	Predicted RBP	18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	OR52K2	Q8NGK3	314 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	STK32A	Q8WU08	396 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	OR8D1	Q8WZ84	308 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	KLHDC7B	Q96G42	594 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	DPH1	Q9BZG8	443 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	POLR1B	Q9H9Y6	1135 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	USP29	Q9HBJ7	922 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	CPNE5	Q9HCH3	593 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	CA5B	Q9Y2D0	317 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190	PIEZO2	Q9H5I5	2752 aa		18.83	■□□□□ 0.6
IRF3-231	ENST00000602190		B8ZZF3	427 aa		18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	MPO	P05164	745 aa		18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	GABRE	P78334	506 aa		18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	FKBP3	Q00688	224 aa	Known RBP	18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	ZNF284	Q2VY69	593 aa		18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	DCAF17	Q5H9S7	520 aa	Predicted RBP	18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	CHSY1	Q86X52	802 aa		18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	KAT5	Q92993	513 aa		18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	DEPDC7	Q96QD5	511 aa		18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	SLC4A5	Q9BY07	1137 aa		18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	NLGN3	Q9NZ94	848 aa		18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	TRPM6	Q9BX84	2022 aa		18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	PTPN13	Q12923	2485 aa		18.82	■□□□□ 0.6
IRF3-231	ENST00000602190	RP1	P56715	2156 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190		A0A1W2PQ27	194 aa		18.81	■□□□□ 0.6
IRF3-231	ENST00000602190		A0A1W2PQ64	194 aa		18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms