RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 CHMP2BQ9UQN3 213 aa20.51■□□□□ 0.87
PNKP-214ENST00000600573 SOBPA7XYQ1 873 aa20.5■□□□□ 0.87
PNKP-214ENST00000600573 KCNQ1P51787 676 aa20.5■□□□□ 0.87
PNKP-214ENST00000600573 TMED2Q15363 201 aa20.5■□□□□ 0.87
PNKP-214ENST00000600573 CCNJLQ8IV13 435 aa20.5■□□□□ 0.87
PNKP-214ENST00000600573 TNS4Q8IZW8 715 aa20.5■□□□□ 0.87
PNKP-214ENST00000600573 CENPTQ96BT3 561 aa20.5■□□□□ 0.87
PNKP-214ENST00000600573 ALG13Q9NP73 1137 aaKnown RBP20.5■□□□□ 0.87
PNKP-214ENST00000600573 MPP6Q9NZW5 540 aa20.5■□□□□ 0.87
PNKP-214ENST00000600573 STOML2Q9UJZ1 356 aa20.5■□□□□ 0.87
PNKP-214ENST00000600573 NR2E3Q9Y5X4 410 aa20.5■□□□□ 0.87
PNKP-214ENST00000600573 KCNK1O00180 336 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 MAFKO60675 156 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 STC2O76061 302 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 CCNB1P14635 433 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 HOXA9P31269 272 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 ELK3P41970 407 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 TTC39BQ5VTQ0 682 aaPredicted RBP20.49■□□□□ 0.87
PNKP-214ENST00000600573 LRRC8BQ6P9F7 803 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 ELMSAN1Q6PJG2 1045 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 TMEM150AQ86TG1 271 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 EXOC3L1Q86VI1 746 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 TP53INP2Q8IXH6 220 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 IL12RB2Q99665 862 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 GBA3Q9H227 469 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 ACSS3Q9H6R3 686 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 RSPH14Q9UHP6 348 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 ZNF510Q9Y2H8 683 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 ACTL7BQ9Y614 415 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 TEX264Q9Y6I9 313 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 SHROOM3Q8TF72 1996 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 CACNG3O60359 315 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 SUN1O94901 812 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 MBL2P11226 248 aaPredicted RBP20.49■□□□□ 0.87
PNKP-214ENST00000600573 MAGEA3P43357 314 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 IFNAR2P48551 515 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 PAPOLAP51003 745 aaKnown RBP20.49■□□□□ 0.87
PNKP-214ENST00000600573 RENBPP51606 427 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 CLCN4P51793 760 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 CDH4P55283 916 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 HNRNPDQ14103 355 aaKnown RBP20.49■□□□□ 0.87
PNKP-214ENST00000600573 ZSCAN26Q16670 478 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 PPM1LQ5SGD2 360 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 ADGRF1Q5T601 910 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 PLPP4Q5VZY2 271 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 NADSYN1Q6IA69 706 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 CNPY4Q8N129 248 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 LEMD2Q8NC56 503 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 MICAL1Q8TDZ2 1067 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 NSMCE1Q8WV22 266 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 MAML1Q92585 1016 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 IGSF8Q969P0 613 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 NAT9Q9BTE0 207 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 RNF38Q9H0F5 515 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 EPN3Q9H201 632 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 HAUS2Q9NVX0 235 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 PSMC3IPQ9P2W1 217 aaPredicted RBP20.49■□□□□ 0.87
PNKP-214ENST00000600573 IPO11Q9UI26 975 aaKnown RBP20.49■□□□□ 0.87
PNKP-214ENST00000600573 RABGEF1Q9UJ41 708 aa20.49■□□□□ 0.87
PNKP-214ENST00000600573 AAR2Q9Y312 384 aaKnown RBP20.49■□□□□ 0.87
PNKP-214ENST00000600573 POC1B-GALNT4F8VUJ3 575 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 RAMP2O60895 175 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 CLDN11O75508 207 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 JCHAINP01591 159 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 SPATA31D3P0C874 917 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 HDCP19113 662 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 DDX6P26196 483 aaKnown RBP eCLIP20.48■□□□□ 0.87
PNKP-214ENST00000600573 GCAP28676 217 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 SSTR1P30872 391 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 CORO1AP31146 461 aaKnown RBP20.48■□□□□ 0.87
PNKP-214ENST00000600573 GEMIN4P57678 1058 aaKnown RBP20.48■□□□□ 0.87
PNKP-214ENST00000600573 SYCP2LQ5T4T6 812 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 SPATA31D4Q6ZUB0 917 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 CHST9Q7L1S5 443 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 CAND1Q86VP6 1230 aaKnown RBP20.48■□□□□ 0.87
PNKP-214ENST00000600573 KLHDC8BQ8IXV7 354 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 LGI2Q8N0V4 545 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 ZSCAN18Q8TBC5 510 aaPredicted RBP20.48■□□□□ 0.87
PNKP-214ENST00000600573 TGS1Q96RS0 853 aaKnown RBP20.48■□□□□ 0.87
PNKP-214ENST00000600573 LRRC3Q9BY71 257 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 ZNF334Q9HCZ1 680 aaPredicted RBP20.48■□□□□ 0.87
PNKP-214ENST00000600573 ASAH2Q9NR71 780 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 ZNF212Q9UDV6 495 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 PCDHA11Q9Y5I1 949 aa20.48■□□□□ 0.87
PNKP-214ENST00000600573 C2orf78A6NCI8 922 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 RASA4BC9J798 803 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 TRDMT1O14717 391 aaKnown RBP20.47■□□□□ 0.87
PNKP-214ENST00000600573 ZBTB24O43167 697 aaPredicted RBP20.47■□□□□ 0.87
PNKP-214ENST00000600573 RASA4O43374 803 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 HNRNPA1P09651 372 aaKnown RBP eCLIP20.47■□□□□ 0.87
PNKP-214ENST00000600573 CHN1P15882 459 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 PSMB4P28070 264 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 GABRR2P28476 465 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 SLC7A9P82251 487 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 TNK2Q07912 1038 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 POLD3Q15054 466 aaPredicted RBP20.47■□□□□ 0.87
PNKP-214ENST00000600573 ALFQ53S48 1182 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 FAM133BQ5BKY9 247 aaKnown RBP20.47■□□□□ 0.87
PNKP-214ENST00000600573 C3orf62Q6ZUJ4 267 aa20.47■□□□□ 0.87
PNKP-214ENST00000600573 TMC8Q8IU68 726 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms