RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 EDDM13A0A1B0GTR0 161 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 A0A1W2PQC6 194 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 LRRC53A6NM62 1247 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 MID1O15344 667 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 ATP9BO43861 1147 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 KCNK5O95279 499 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 MOCS3O95396 460 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 CFIP05156 583 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 IGHV4-34P06331 123 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 ADRB1P08588 477 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 ACADMP11310 421 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 GLDCP23378 1020 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 DRD3P35462 400 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 DPP6P42658 865 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 MAPK8P45983 427 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 NSFP46459 744 aaKnown RBP12.48□□□□□ -0.41
LIG1-217ENST00000599165 ST8SIA6P61647 398 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 ZNF177Q13360 481 aaPredicted RBP12.48□□□□□ -0.41
LIG1-217ENST00000599165 NR1I3Q14994 352 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 CST6Q15828 149 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 CDO1Q16878 200 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 RNF219Q5W0B1 726 aaPredicted RBP12.48□□□□□ -0.41
LIG1-217ENST00000599165 IL31Q6EBC2 164 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 WDR59Q6PJI9 974 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 TFAP2DQ7Z6R9 452 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 LUZP1Q86V48 1076 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 MMAAQ8IVH4 418 aaKnown RBP12.48□□□□□ -0.41
LIG1-217ENST00000599165 ZCCHC9Q8N567 271 aaKnown RBP12.48□□□□□ -0.41
LIG1-217ENST00000599165 CCDC185Q8N715 623 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 MSANTD4Q8NCY6 345 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 C3orf20Q8ND61 904 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 FOXJ1Q92949 421 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 VOPP1Q96AW1 172 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 HAPLN3Q96S86 360 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 NUSAP1Q9BXS6 441 aaKnown RBP12.48□□□□□ -0.41
LIG1-217ENST00000599165 EBF2Q9HAK2 575 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 NDFIP2Q9NV92 336 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 EIF2B4Q9UI10 523 aaKnown RBP12.48□□□□□ -0.41
LIG1-217ENST00000599165 SARDHQ9UL12 918 aa12.48□□□□□ -0.41
LIG1-217ENST00000599165 MAP1BP46821 2468 aaKnown RBP12.47□□□□□ -0.41
LIG1-217ENST00000599165 A0A1W2PP55 124 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 SIGLEC16A6NMB1 481 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 SMTNL1A8MU46 457 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 K7ERQ8 282 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 PLK4O00444 970 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 ARHGAP33O14559 1287 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 SMAD6O43541 496 aaKnown RBP12.47□□□□□ -0.41
LIG1-217ENST00000599165 ZMPSTE24O75844 475 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 SEMA4FO95754 770 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 DNTTP04053 509 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 KRT3P12035 628 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 SRCP12931 536 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 FERP16591 822 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 RRM1P23921 792 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 ADRA1BP35368 520 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 RPL7AP62424 266 aaKnown RBP12.47□□□□□ -0.41
LIG1-217ENST00000599165 NRG1Q02297 640 aaPredicted RBP12.47□□□□□ -0.41
LIG1-217ENST00000599165 SULT2A1Q06520 285 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
LIG1-217ENST00000599165 SEMA3BQ13214 749 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 N4BP2L1Q5TBK1 243 aaPredicted RBP12.47□□□□□ -0.41
LIG1-217ENST00000599165 ACAD10Q6JQN1 1059 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 USP30Q70CQ3 517 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 SND1Q7KZF4 910 aaKnown RBP eCLIP12.47□□□□□ -0.41
LIG1-217ENST00000599165 STRADAQ7RTN6 431 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 PIP4P1Q86T03 277 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 NLRP14Q86W24 1093 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 CCDC117Q8IWD4 279 aaPredicted RBP12.47□□□□□ -0.41
LIG1-217ENST00000599165 RGL4Q8IZJ4 473 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 MCOLN2Q8IZK6 566 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 SH2D3CQ8N5H7 860 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 OR7D4Q8NG98 312 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 CEP76Q8TAP6 659 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 BIRC7Q96CA5 298 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 PCED1AQ9H1Q7 454 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 NEUROG2Q9H2A3 272 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 ADAMTS1Q9UHI8 967 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 VPS51Q9UID3 782 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 MYO6Q9UM54 1294 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 HS3ST2Q9Y278 367 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 ACTL7AQ9Y615 435 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 SPEGQ15772 3267 aa12.47□□□□□ -0.41
LIG1-217ENST00000599165 A0A1B0GTW7 788 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 MEI4A8MW99 385 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 DDX3XO00571 662 aaKnown RBP eCLIP12.46□□□□□ -0.412e-12■■■□□ 16.8
LIG1-217ENST00000599165 CCP110O43303 1012 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 ZNF821O75541 412 aaPredicted RBP12.46□□□□□ -0.41
LIG1-217ENST00000599165 CD160O95971 181 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 CTSLP07711 333 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 RHOCP08134 193 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 CD59P13987 128 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 GPD1P21695 349 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 SDC4P31431 198 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 SLC8A1P32418 973 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 PRKCIP41743 596 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 PSMD8P48556 350 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 GALCP54803 685 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 OXCT1P55809 520 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 ARF5P84085 180 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 ZNF252P-AS1Q0IIN9 211 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms