RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PAPSS1O43252 624 aaPredicted RBP13.32□□□□□ -0.28
SCAF1-202ENST00000595242 SYNCRIPO60506 623 aaKnown RBP13.32□□□□□ -0.28
SCAF1-202ENST00000595242 HLA-DRAP01903 254 aa13.32□□□□□ -0.28
SCAF1-202ENST00000595242 CHRNB2P17787 502 aa13.32□□□□□ -0.28
SCAF1-202ENST00000595242 CTSKP43235 329 aa13.32□□□□□ -0.28
SCAF1-202ENST00000595242 RBP5P82980 135 aa13.32□□□□□ -0.28
SCAF1-202ENST00000595242 MDH1BQ5I0G3 518 aa13.32□□□□□ -0.28
SCAF1-202ENST00000595242 BROXQ5VW32 411 aa13.32□□□□□ -0.28
SCAF1-202ENST00000595242 GATAD2AQ86YP4 633 aa13.32□□□□□ -0.28
SCAF1-202ENST00000595242 NUP93Q8N1F7 819 aa13.32□□□□□ -0.28
SCAF1-202ENST00000595242 TPCN2Q8NHX9 752 aa13.32□□□□□ -0.28
SCAF1-202ENST00000595242 FBXO32Q969P5 355 aa13.32□□□□□ -0.28
SCAF1-202ENST00000595242 NAF1Q96HR8 494 aaKnown RBP13.32□□□□□ -0.28
SCAF1-202ENST00000595242 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
SCAF1-202ENST00000595242 CNTN6Q9UQ52 1028 aa13.32□□□□□ -0.28
SCAF1-202ENST00000595242 CCDC151A5D8V7 595 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 PDE2AO00408 941 aaPredicted RBP13.31□□□□□ -0.28
SCAF1-202ENST00000595242 DFNA5O60443 496 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 SRGAP2O75044 1071 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 RTN2O75298 545 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 MTA2O94776 668 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 NTRK1P04629 796 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 TNNI1P19237 187 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 ACADVLP49748 655 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 TUBP50607 506 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 CLCN6P51797 869 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 COPAP53621 1224 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 ORC1Q13415 861 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 BRD3Q15059 726 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 SNX30Q5VWJ9 437 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 HTR3DQ70Z44 454 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 LIMS2Q7Z4I7 341 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 NOP9Q86U38 636 aaKnown RBP13.31□□□□□ -0.28
SCAF1-202ENST00000595242 ZNF677Q86XU0 584 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 RHOT2Q8IXI1 618 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 SYCE1Q8N0S2 351 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 MMGT1Q8N4V1 131 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 ZNF248Q8NDW4 579 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 SLC20A1Q8WUM9 679 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 CTNNBL1Q8WYA6 563 aaPredicted RBP13.31□□□□□ -0.28
SCAF1-202ENST00000595242 OVCA2Q8WZ82 227 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 TTC9Q92623 222 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 BIRC7Q96CA5 298 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 MED8Q96G25 268 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 NACA2Q9H009 215 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 SIX4Q9UIU6 781 aa13.31□□□□□ -0.28
SCAF1-202ENST00000595242 TDRD6O60522 2096 aaKnown RBP13.3□□□□□ -0.28
SCAF1-202ENST00000595242 A0A1B0GTQ1 180 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 TARSL2A2RTX5 802 aaKnown RBP13.3□□□□□ -0.28
SCAF1-202ENST00000595242 NPC1O15118 1278 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 ATP8B1O43520 1251 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 GREM1O60565 184 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 RTN3O95197 1032 aaPredicted RBP13.3□□□□□ -0.28
SCAF1-202ENST00000595242 ZRANB2O95218 330 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCAF1-202ENST00000595242 KRT10P13645 584 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 CYP11B1P15538 503 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 ACO1P21399 889 aaKnown RBP13.3□□□□□ -0.28
SCAF1-202ENST00000595242 WARSP23381 471 aaKnown RBP13.3□□□□□ -0.28
SCAF1-202ENST00000595242 TBXAS1P24557 533 aaPredicted RBP13.3□□□□□ -0.28
SCAF1-202ENST00000595242 ACSL1P33121 698 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 PIK3CAP42336 1068 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 UCNP55089 124 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 FMO1Q01740 532 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 CDR2Q01850 454 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 ENPP2Q13822 863 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 COLEC12Q5KU26 742 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 WDR93Q6P2C0 686 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 PRICKLE2Q7Z3G6 844 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 ADAT2Q7Z6V5 191 aaKnown RBP13.3□□□□□ -0.28
SCAF1-202ENST00000595242 UBR7Q8N806 425 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 NOA1Q8NC60 698 aaKnown RBP13.3□□□□□ -0.28
SCAF1-202ENST00000595242 COG1Q8WTW3 980 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 TATDN2Q93075 761 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 BHMTQ93088 406 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 HPDLQ96IR7 371 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 PARD6BQ9BYG5 372 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 MTMR12Q9C0I1 747 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCAF1-202ENST00000595242 PLK2Q9NYY3 685 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 THAP10Q9P2Z0 257 aaPredicted RBP13.3□□□□□ -0.28
SCAF1-202ENST00000595242 IL17BQ9UHF5 180 aa13.3□□□□□ -0.28
SCAF1-202ENST00000595242 FLNCQ14315 2725 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 DOCK9Q9BZ29 2069 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 ZNF185O15231 689 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 CYP26A1O43174 497 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 ABCB4P21439 1286 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 GLDCP23378 1020 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 NAP1L1P55209 391 aaKnown RBP13.29□□□□□ -0.28
SCAF1-202ENST00000595242 CDH8P55286 799 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 PCBP4P57723 403 aaKnown RBP13.29□□□□□ -0.28
SCAF1-202ENST00000595242 BPIFB4P59827 614 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 PRAMEF14Q5SWL7 426 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 C11orf63Q6NUN7 778 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 EID2Q8N6I1 236 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 OR5B17Q8NGF7 314 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 SCAMP5Q8TAC9 235 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 FAXDC2Q96IV6 333 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 KCNK16Q96T55 309 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 PCDHB18PQ96TA0 734 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 ZNF518BQ9C0D4 1074 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms