RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 HSF2BPO75031 334 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 VAV1P15498 845 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 PLK1P53350 603 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 PPP2CBP62714 309 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 PPP2CAP67775 309 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 MTA1Q13330 715 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 EIF4EBP2Q13542 120 aaPredicted RBP23.33■■□□□ 1.33
SSBP4-203ENST00000593641 CAMK2BQ13554 666 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 ARHGAP44Q17R89 818 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 ACCSLQ4AC99 568 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 EFHC1Q5JVL4 640 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 FAM46CQ5VWP2 391 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 TRIM65Q6PJ69 517 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 PRPF39Q86UA1 669 aaKnown RBP23.33■■□□□ 1.33
SSBP4-203ENST00000593641 TMPRSS12Q86WS5 348 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 CREBRFQ8IUR6 639 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 SAP25Q8TEE9 199 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 NOX5Q96PH1 765 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 SLC2A13Q96QE2 648 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 ASNSD1Q9NWL6 643 aa23.33■■□□□ 1.33
SSBP4-203ENST00000593641 C10orf142B7Z368 130 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 E9PAM4 449 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 TLR4O00206 839 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 WNT9AO14904 365 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 SLC7A4O43246 635 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 LATO43561 262 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 RFPL3O75679 317 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 CDK4P11802 303 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 EPHA8P29322 1005 aaPredicted RBP23.32■■□□□ 1.32
SSBP4-203ENST00000593641 DRD3P35462 400 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 HNF1BP35680 557 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 NXPH1P58417 271 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 NAPEPLDQ6IQ20 393 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 CXorf57Q6NSI4 855 aaKnown RBP23.32■■□□□ 1.32
SSBP4-203ENST00000593641 GJB7Q6PEY0 223 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 FRS2Q8WU20 508 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 PPP1R13BQ96KQ4 1090 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 CPXM1Q96SM3 734 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 KDM4CQ9H3R0 1056 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 APEX2Q9UBZ4 518 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 IGSF10Q6WRI0 2623 aa23.32■■□□□ 1.32
SSBP4-203ENST00000593641 SMG1Q96Q15 3661 aaKnown RBP23.31■■□□□ 1.32
SSBP4-203ENST00000593641 C1QTNF3-AMACRE9PGA6 284 aa23.31■■□□□ 1.32
SSBP4-203ENST00000593641 NUDT1P36639 197 aa23.31■■□□□ 1.32
SSBP4-203ENST00000593641 VASPP50552 380 aaPredicted RBP23.31■■□□□ 1.32
SSBP4-203ENST00000593641 CENPCQ03188 943 aa23.31■■□□□ 1.32
SSBP4-203ENST00000593641 SHBQ15464 509 aa23.31■■□□□ 1.32
SSBP4-203ENST00000593641 FBXL22Q6P050 247 aa23.31■■□□□ 1.32
SSBP4-203ENST00000593641 GBP6Q6ZN66 633 aa23.31■■□□□ 1.32
SSBP4-203ENST00000593641 PASD1Q8IV76 773 aa23.31■■□□□ 1.32
SSBP4-203ENST00000593641 EID2Q8N6I1 236 aa23.31■■□□□ 1.32
SSBP4-203ENST00000593641 ERVMER34-1Q9H9K5 563 aa23.31■■□□□ 1.32
SSBP4-203ENST00000593641 VANGL2Q9ULK5 521 aa23.31■■□□□ 1.32
SSBP4-203ENST00000593641 MYLKQ15746 1914 aa23.31■■□□□ 1.32
SSBP4-203ENST00000593641 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.3■■□□□ 1.32
SSBP4-203ENST00000593641 BECN2A8MW95 431 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 CBX4O00257 560 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 MAGEC1O60732 1142 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 GRAP2O75791 330 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 C1SP09871 688 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 JUPP14923 745 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 SNX16P57768 344 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 DNAJC3Q13217 504 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 NME3Q13232 169 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 ZNF177Q13360 481 aaPredicted RBP23.3■■□□□ 1.32
SSBP4-203ENST00000593641 AUHQ13825 339 aaKnown RBP23.3■■□□□ 1.32
SSBP4-203ENST00000593641 C11orf57Q6ZUT1 292 aaPredicted RBP23.3■■□□□ 1.32
SSBP4-203ENST00000593641 MFSD2AQ8NA29 543 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 VPS28Q9UK41 221 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 PCDHGC3Q9UN70 934 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 DMTF1Q9Y222 760 aa23.3■■□□□ 1.32
SSBP4-203ENST00000593641 PLRG1O43660 514 aaKnown RBP23.29■■□□□ 1.32
SSBP4-203ENST00000593641 ATP9BO43861 1147 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 RTN2O75298 545 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 ZNF18P17022 549 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 SLC9A1P19634 815 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 MAT2AP31153 395 aaKnown RBP23.29■■□□□ 1.32
SSBP4-203ENST00000593641 METAP1P53582 386 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 EXOC3L4Q17RC7 722 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 C6orf118Q5T5N4 469 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 OR6B2Q6IFH4 312 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 FAM183BPQ6ZVS7 135 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 FAM131CQ96AQ9 280 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 NXPE2Q96DL1 559 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 LRIG1Q96JA1 1093 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 FEM1AQ9BSK4 669 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 SYNCQ9H7C4 482 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 HS3ST4Q9Y661 456 aa23.29■■□□□ 1.32
SSBP4-203ENST00000593641 TDRD6O60522 2096 aaKnown RBP23.28■■□□□ 1.32
SSBP4-203ENST00000593641 PLK4O00444 970 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 ALOX15BO15296 676 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 CLDN11O75508 207 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 RXRGP48443 463 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 ACADVLP49748 655 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 PTK2Q05397 1052 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 OVGP1Q12889 678 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 STAT4Q14765 748 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 DLG2Q15700 870 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 Q6ZVU0 165 aa23.28■■□□□ 1.32
SSBP4-203ENST00000593641 IQCHQ86VS3 1027 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms