RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 GJB7Q6PEY0 223 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 KANSL1Q7Z3B3 1105 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 ELOA2Q8IYF1 753 aaPredicted RBP16.85■□□□□ 0.29
LIG1-205ENST00000593425 TBC1D3Q8IZP1 549 aaPredicted RBP16.85■□□□□ 0.29
LIG1-205ENST00000593425 DEFB106AQ8N104 65 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 ALG14Q96F25 216 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 DCBLD2Q96PD2 775 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 SPAG5Q96R06 1193 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 MED15Q96RN5 788 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 FAM204AQ9H8W3 233 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 COX16Q9P0S2 106 aa16.85■□□□□ 0.29
LIG1-205ENST00000593425 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.85■□□□□ 0.29
LIG1-205ENST00000593425 BECN2A8MW95 431 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 BIN1O00499 593 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 PLRG1O43660 514 aaKnown RBP16.84■□□□□ 0.29
LIG1-205ENST00000593425 MAT2AP31153 395 aaKnown RBP16.84■□□□□ 0.29
LIG1-205ENST00000593425 GGCXP38435 758 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 ARRB1P49407 418 aaPredicted RBP16.84■□□□□ 0.29
LIG1-205ENST00000593425 PLK1P53350 603 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 SULT2A1Q06520 285 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 POM121L1PQ3SYA9 428 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 SLC45A4Q5BKX6 768 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 HES3Q5TGS1 186 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 SFMBT2Q5VUG0 894 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 WDTC1Q8N5D0 677 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 MFSD2AQ8NA29 543 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 TSC1Q92574 1164 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 NXPE2Q96DL1 559 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 CPXM1Q96SM3 734 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 SRRTQ9BXP5 876 aaKnown RBP16.84■□□□□ 0.29
LIG1-205ENST00000593425 DDIT4Q9NX09 232 aa16.84■□□□□ 0.29
LIG1-205ENST00000593425 TPX2Q9ULW0 747 aaKnown RBP16.84■□□□□ 0.29
LIG1-205ENST00000593425 URB1O60287 2271 aaKnown RBP16.83■□□□□ 0.28
LIG1-205ENST00000593425 GRAP2O75791 330 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 GNA14O95837 355 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 JUPP14923 745 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 HNF1BP35680 557 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 RXRGP48443 463 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 APBA1Q02410 837 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 CNTN1Q12860 1018 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 PAK1Q13153 545 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 RABGAP1LQ5R372 815 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 TTC39BQ5VTQ0 682 aaPredicted RBP16.83■□□□□ 0.28
LIG1-205ENST00000593425 AGBL4Q5VU57 503 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 FBXL19Q6PCT2 694 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 Q6ZVU0 165 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 PRPF39Q86UA1 669 aaKnown RBP16.83■□□□□ 0.28
LIG1-205ENST00000593425 OR8D1Q8WZ84 308 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 RPRD1AQ96P16 312 aaPredicted RBP16.83■□□□□ 0.28
LIG1-205ENST00000593425 SLC2A13Q96QE2 648 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 ERVMER34-1Q9H9K5 563 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 SLC12A6Q9UHW9 1150 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 VANGL2Q9ULK5 521 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 CA5BQ9Y2D0 317 aa16.83■□□□□ 0.28
LIG1-205ENST00000593425 SLC7A4O43246 635 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 TLX3O43711 291 aaPredicted RBP16.82■□□□□ 0.28
LIG1-205ENST00000593425 ATP9BO43861 1147 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 SDC3O75056 442 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 C1SP09871 688 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 ITPKBP27987 946 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 CCR1P32246 355 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 ABCG1P45844 678 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 VASPP50552 380 aaPredicted RBP16.82■□□□□ 0.28
LIG1-205ENST00000593425 CDK17Q00537 523 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 TARDBPQ13148 414 aaKnown RBP eCLIP16.82■□□□□ 0.28
LIG1-205ENST00000593425 AUHQ13825 339 aaKnown RBP16.82■□□□□ 0.28
LIG1-205ENST00000593425 ARHGAP44Q17R89 818 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 ACCSLQ4AC99 568 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 C6orf118Q5T5N4 469 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 TRIM65Q6PJ69 517 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 TRIM69Q86WT6 500 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 PASD1Q8IV76 773 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 OXR1Q8N573 874 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 PIP4K2CQ8TBX8 421 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 FEM1AQ9BSK4 669 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 CRACR2AQ9BSW2 395 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 KDM4CQ9H3R0 1056 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 SLC25A13Q9UJS0 675 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 OR51B4Q9Y5P0 310 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 HS3ST4Q9Y661 456 aa16.82■□□□□ 0.28
LIG1-205ENST00000593425 GLI1P08151 1106 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 SLC2A3P11169 496 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 CDK4P11802 303 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 SLC9A1P19634 815 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 USP8P40818 1118 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 DLG2Q15700 870 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 OTUD1Q5VV17 481 aaPredicted RBP16.81■□□□□ 0.28
LIG1-205ENST00000593425 FAM183BPQ6ZVS7 135 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 ENOSF1Q7L5Y1 443 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 DSG4Q86SJ6 1040 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 C14orf80Q86SX3 495 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 RNF34Q969K3 372 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 PPP1R13BQ96KQ4 1090 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 ASNSD1Q9NWL6 643 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 PPM1HQ9ULR3 514 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 DMTF1Q9Y222 760 aa16.81■□□□□ 0.28
LIG1-205ENST00000593425 C1QTNF3-AMACRE9PGA6 284 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 MCF2LO15068 1137 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 BNIP3LO60238 219 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 HSF2BPO75031 334 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms