RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 K7ERQ8 282 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 CASC3O15234 703 aaKnown RBP11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 ATXN7O15265 892 aaPredicted RBP11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 PLRG1O43660 514 aaKnown RBP11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 LETM1O95202 739 aaPredicted RBP11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 IGLV3-25P01717 112 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 CTSLP07711 333 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 CKMT2P17540 419 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 CLDN2P57739 230 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 CXADRP78310 365 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 C19orf57Q0VDD7 668 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 RTP5Q14D33 572 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 PROX2Q3B8N5 592 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 FBXL22Q6P050 247 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 C14orf80Q86SX3 495 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 PRPF39Q86UA1 669 aaKnown RBP11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 ERICH1Q86X53 443 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 SPACA3Q8IXA5 215 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 FMR1NBQ8N0W7 255 aaPredicted RBP11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 MFSD2AQ8NA29 543 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 SKA1Q96BD8 255 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 ALG14Q96F25 216 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 GTPBP4Q9BZE4 634 aaKnown RBP11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 CLCA2Q9UQC9 943 aa11.54□□□□□ -0.56
PRKCSH-220ENST00000593104 PTPRQQ9UMZ3 2332 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 CYSRT1A8MQ03 144 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 E9PAM4 449 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 SNAP91O60641 907 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 RNGTTO60942 597 aaKnown RBP11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 MT-CO1P00395 513 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 MPOP05164 745 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 GIMD1P0DJR0 217 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 PLA2G2AP14555 144 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 RXRGP48443 463 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 RPL34P49207 117 aaKnown RBP11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 STX17P56962 302 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 NUCB2P80303 420 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 TLE3Q04726 772 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 NNTQ13423 1086 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 DLG2Q15700 870 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 SLC45A4Q5BKX6 768 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 PASD1Q8IV76 773 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 DEFB106AQ8N104 65 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 ZNF843Q8N446 348 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 KDM1BQ8NB78 822 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 SNIP1Q8TAD8 396 aaKnown RBP11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 OR8D1Q8WZ84 308 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 FAM131CQ96AQ9 280 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 ARRDC3Q96B67 414 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 SPAG5Q96R06 1193 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 SLC4A5Q9BY07 1137 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 NRSN2Q9GZP1 204 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 OSBPL2Q9H1P3 480 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 FAM204AQ9H8W3 233 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 CPNE5Q9HCH3 593 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 ANLNQ9NQW6 1124 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 TMPRSS4Q9NRS4 437 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 RMND1Q9NWS8 449 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 MAN1B1Q9UKM7 699 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 VANGL2Q9ULK5 521 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 PPM1HQ9ULR3 514 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 CTNND2Q9UQB3 1225 aa11.53□□□□□ -0.56
PRKCSH-220ENST00000593104 A0A1B0GVM2 712 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 PMS2P1A4D2B8 440 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 KCNU1A8MYU2 1149 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 BIN1O00499 593 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 YKT6O15498 198 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 RRP8O43159 456 aaKnown RBP11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 THAP12O43422 761 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 NEBLO76041 1014 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 CNTN5O94779 1100 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 ENDOD1O94919 500 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 MT-CO3P00414 261 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 C1SP09871 688 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 TFE3P19532 575 aaPredicted RBP11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 BMP6P22004 513 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 DAB2P98082 770 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 LRRC63Q05C16 580 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 SFSWAPQ12872 951 aaKnown RBP11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 NME3Q13232 169 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 EIF4EBP2Q13542 120 aaPredicted RBP11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 STAT4Q14765 748 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 TBC1D25Q3MII6 688 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 COBLL1Q53SF7 1204 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 PIP5KL1Q5T9C9 394 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 SEL1L3Q68CR1 1132 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 OR6B2Q6IFH4 312 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 TTI2Q6NXR4 508 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 LINGO4Q6UY18 593 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 ZNF557Q8N988 423 aaPredicted RBP11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 CHST14Q8NCH0 376 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 EHBP1Q8NDI1 1231 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 OR13H1Q8NG92 308 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 ZNF606Q8WXB4 792 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 FGF11Q92914 225 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 SMARCE1Q969G3 411 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 KLHDC7BQ96G42 594 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 BTN2A3PQ96KV6 586 aa11.52□□□□□ -0.57
PRKCSH-220ENST00000593104 RPRD1AQ96P16 312 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms