RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 LRP10Q7Z4F1 713 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 PRRT2Q7Z6L0 340 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 CACUL1Q86Y37 369 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 DEFB107AQ8IZN7 70 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 CCDC33Q8N5R6 958 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 GPR20Q99678 358 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 KCTD14Q9BQ13 255 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 TKTL2Q9H0I9 626 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 GPAMQ9HCL2 828 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 GGA2Q9UJY4 613 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 PTCH2Q9Y6C5 1203 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 FCHO1O14526 889 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 NFICP08651 508 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 CRABP2P29373 138 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 SPANXN3Q5MJ09 141 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 TBCELQ5QJ74 424 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 ATAT1Q5SQI0 421 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 ARHGAP17Q68EM7 881 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 SERPINA13PQ6UXR4 307 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 WNT8BQ93098 351 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 OXNAD1Q96HP4 312 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 BTBD7Q9P203 1132 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 C15orf41Q9Y2V0 281 aa13.55□□□□□ -0.24
SMARCA4-216ENST00000591545 FAM208AQ9UK61 1670 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 E9PBE3 544 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 NFKBIEO00221 500 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 KLHL41O60662 606 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 ZNF7P17097 686 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 MAPK9P45984 424 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 NR2C2P49116 596 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 NPY2RP49146 381 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 MEA1Q16626 185 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 ANKS6Q68DC2 871 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 COLGALT1Q8NBJ5 622 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 TMEM161BQ8NDZ6 487 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 SETD9Q8NE22 299 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 ADAM32Q8TC27 787 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 MTMR8Q96EF0 704 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 RMND5BQ96G75 393 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 ASB2Q96Q27 587 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 VANGL2Q9ULK5 521 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 SORCS3Q9UPU3 1222 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 PGAM1P18669 254 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 MAPK8P45983 427 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 TRIM71Q2Q1W2 868 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 LPCAT2Q7L5N7 544 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 OTOP2Q7RTS6 562 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 YTHDF3Q7Z739 585 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 LRRC39Q96DD0 335 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 FAM120BQ96EK7 910 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 OLFM1Q99784 485 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 CROTQ9UKG9 612 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 RPTORQ8N122 1335 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 TRIM13O60858 407 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 SNUPNO95149 360 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 DARSP14868 501 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 CD151P48509 253 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 SLC1A6P48664 564 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 PRKCZQ05513 592 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 CDH17Q12864 832 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 CNGA2Q16280 664 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 SNX30Q5VWJ9 437 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 IFNL1Q8IU54 200 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 ARHGEF19Q8IW93 802 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 DLG3Q92796 817 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 TMEM79Q9BSE2 394 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 NLNQ9BYT8 704 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 RAD18Q9NS91 495 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 HACD1B0YJ81 288 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 PSMD12O00232 456 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 TRDMT1O14717 391 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 FGF10O15520 208 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 FGFR1P11362 822 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 CHI3L1P36222 383 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 SKIV2L2P42285 1042 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 SNRPD1P62314 119 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 GALNTL6Q49A17 601 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 AGKQ53H12 422 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 NOL9Q5SY16 702 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 LRRC52Q8N7C0 313 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 B3GALNT2Q8NCR0 500 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 SPPL2BQ8TCT7 592 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 CPNE1Q99829 537 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 KLHL25Q9H0H3 589 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 RNF19AQ9NV58 838 aa13.54□□□□□ -0.24
SMARCA4-216ENST00000591545 KIF13AQ9H1H9 1805 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 TMEM114B3SHH9 223 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 E5RJQ4 531 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 KPNA4O00629 521 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 ATP6V1B2P21281 511 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 CCT8P50990 548 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 USP45Q70EL2 814 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 HDDC2Q7Z4H3 204 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 METTL3Q86U44 580 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 KAT2BQ92831 832 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 HAS1Q92839 578 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 ZBTB10Q96DT7 871 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 NSMCE2Q96MF7 247 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 VAT1Q99536 393 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms