RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SNRNP25Q9BV90 132 aaKnown RBP11.83□□□□□ -0.52
VMP1-211ENST00000591315 ZYG11BQ9C0D3 744 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 MUC3BQ9H195 1237 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 SEMA4AQ9H3S1 761 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 SMOC1Q9H4F8 434 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 NOL6Q9H6R4 1146 aaKnown RBP11.83□□□□□ -0.52
VMP1-211ENST00000591315 PRDM16Q9HAZ2 1276 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 PARD6AQ9NPB6 346 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 DNAI1Q9UI46 699 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 VPS51Q9UID3 782 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 VPS28Q9UK41 221 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 CYP8B1Q9UNU6 501 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 TFR2Q9UP52 801 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 PLXND1Q9Y4D7 1925 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 IGHV1OR15-9A0A0B4J2B8 117 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 SSU72P8A0A1W2PR75 194 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 NPC1O15118 1278 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 SMAD6O43541 496 aaKnown RBP11.82□□□□□ -0.52
VMP1-211ENST00000591315 CREB3O43889 395 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 MOCS3O95396 460 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 ASLP04424 464 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 TPM1P09493 284 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 L1CAMP32004 1257 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 CNR2P34972 360 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 RPS14P62263 151 aaKnown RBP11.82□□□□□ -0.52
VMP1-211ENST00000591315 NRG1Q02297 640 aaPredicted RBP11.82□□□□□ -0.52
VMP1-211ENST00000591315 SEMA3BQ13214 749 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 MTA1Q13330 715 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 HNRNPA1L2Q32P51 320 aaKnown RBP11.82□□□□□ -0.52
VMP1-211ENST00000591315 EFHC2Q5JST6 749 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 KCNT1Q5JUK3 1230 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 LEKR1Q6ZMV7 388 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 ARMCX6Q7L4S7 300 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 STK40Q8N2I9 435 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 ZNF557Q8N988 423 aaPredicted RBP11.82□□□□□ -0.52
VMP1-211ENST00000591315 OR2T3Q8NH03 318 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 FNIP1Q8TF40 1166 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 TBC1D31Q96DN5 1066 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 TRIM11Q96F44 468 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 MRFAP1L1Q96HT8 127 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 KLC2Q9H0B6 622 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 DEF6Q9H4E7 631 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 DHX35Q9H5Z1 703 aaKnown RBP11.82□□□□□ -0.52
VMP1-211ENST00000591315 ZNHIT6Q9NWK9 470 aaKnown RBP11.82□□□□□ -0.52
VMP1-211ENST00000591315 PPARGC1AQ9UBK2 798 aaKnown RBP11.82□□□□□ -0.52
VMP1-211ENST00000591315 ANAPC7Q9UJX3 599 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 AP4E1Q9UPM8 1137 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 SCINQ9Y6U3 715 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 SPTBN2O15020 2390 aa11.82□□□□□ -0.52
VMP1-211ENST00000591315 NYNRINQ9P2P1 1898 aaKnown RBP11.81□□□□□ -0.52
VMP1-211ENST00000591315 RNF103O00237 685 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 PLK4O00444 970 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 ZMPSTE24O75844 475 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 SRPRAP08240 638 aaKnown RBP11.81□□□□□ -0.52
VMP1-211ENST00000591315 H2AFZP0C0S5 128 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 RHOQP17081 205 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 TGM1P22735 817 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 EPHB2P29323 1055 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 PTGER3P43115 390 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 METAP1P53582 386 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 ST8SIA6P61647 398 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 GNA12Q03113 381 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 SPEM2Q0P670 501 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 SLC12A1Q13621 1099 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 DLG2Q15700 870 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 TSR1Q2NL82 804 aaKnown RBP11.81□□□□□ -0.52
VMP1-211ENST00000591315 SMTNL2Q2TAL5 461 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 H2AFVQ71UI9 128 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.81□□□□□ -0.52
VMP1-211ENST00000591315 FAM124AQ86V42 546 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 CNGA4Q8IV77 575 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 ZNF564Q8TBZ8 553 aaPredicted RBP11.81□□□□□ -0.52
VMP1-211ENST00000591315 FRS2Q8WU20 508 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 RUBCNQ92622 972 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 PTPRN2Q92932 1015 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 SIPA1Q96FS4 1042 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 CCDC42Q96M95 316 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 FAM129BQ96TA1 746 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 HINFPQ9BQA5 517 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 ARRDC1-AS1Q9H2J1 176 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 ZWILCHQ9H900 591 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 MRPL47Q9HD33 250 aaKnown RBP11.81□□□□□ -0.52
VMP1-211ENST00000591315 OSGEPQ9NPF4 335 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 TMEM248Q9NWD8 314 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 CTTNBP2NLQ9P2B4 639 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 NCDNQ9UBB6 729 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 RAB23Q9ULC3 237 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 MFHAS1Q9Y4C4 1052 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 DOCK9Q9BZ29 2069 aa11.81□□□□□ -0.52
VMP1-211ENST00000591315 ILVBLA1L0T0 632 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 TMEM110-MUSTN1A8MSY1 372 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 CBX4O00257 560 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 BNIP3LO60238 219 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 PRPSAP2O60256 369 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 RNF8O76064 485 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 CD160O95971 181 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 SRCP12931 536 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 GOT1P17174 413 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 TPMTP51580 245 aa11.8□□□□□ -0.52
VMP1-211ENST00000591315 TAS2R40P59535 323 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms