RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 DCLK1O15075 740 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 NPC1O15118 1278 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 PI15O43692 258 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 ATG13O75143 517 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 ZRANB2O95218 330 aaKnown RBP eCLIP14.33□□□□□ -0.12
RPAIN-217ENST00000575711 DLDP09622 509 aaKnown RBP14.33□□□□□ -0.12
RPAIN-217ENST00000575711 SERPINB6P35237 376 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 NUMBP49757 651 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 NDST2P52849 883 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 RWDD2BP57060 319 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 YBEYP58557 167 aaPredicted RBP14.33□□□□□ -0.12
RPAIN-217ENST00000575711 POLD3Q15054 466 aaPredicted RBP14.33□□□□□ -0.12
RPAIN-217ENST00000575711 PARP15Q460N3 678 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 HSF5Q4G112 596 aaPredicted RBP14.33□□□□□ -0.12
RPAIN-217ENST00000575711 C2orf27AQ580R0 203 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 TMEM31Q5JXX7 168 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 EMC10Q5UCC4 262 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 EGFLAMQ63HQ2 1017 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 Q6ZS52 159 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 ZNF354CQ86Y25 554 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 CCDC50Q8IVM0 306 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 UMODL1-AS1Q8N2C9 162 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 DCAF4L2Q8NA75 395 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 OR7D4Q8NG98 312 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 EXD1Q8NHP7 514 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 RPLP0P6Q8NHW5 317 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.33□□□□□ -0.12
RPAIN-217ENST00000575711 USP33Q8TEY7 942 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 SORCS1Q8WY21 1168 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 FAF2Q96CS3 445 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 SPON2Q9BUD6 331 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 C2orf49Q9BVC5 232 aaPredicted RBP14.33□□□□□ -0.12
RPAIN-217ENST00000575711 ATP13A1Q9HD20 1204 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 C11orf16Q9NQ32 467 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 PACSIN2Q9UNF0 486 aaPredicted RBP14.33□□□□□ -0.12
RPAIN-217ENST00000575711 PLA2G4CQ9UP65 541 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 OR51B4Q9Y5P0 310 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 F5P12259 2224 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 C3orf70A6NLC5 250 aaPredicted RBP14.32□□□□□ -0.12
RPAIN-217ENST00000575711 RASA4BC9J798 803 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 RASA4O43374 803 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 HNRNPLP14866 589 aaKnown RBP eCLIP14.32□□□□□ -0.12
RPAIN-217ENST00000575711 ACVRL1P37023 503 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 CETN2P41208 172 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 ST8SIA6P61647 398 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 ECT2LQ008S8 904 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 FNDC3BQ53EP0 1204 aaKnown RBP14.32□□□□□ -0.12
RPAIN-217ENST00000575711 SDE2Q6IQ49 451 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 MFSD7Q6UXD7 560 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 SPOCD1Q6ZMY3 1216 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 RFX6Q8HWS3 928 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 CHPFQ8IZ52 775 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 PCDH19Q8TAB3 1148 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 CYB5D2Q8WUJ1 264 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 ARHGEF2Q92974 986 aaKnown RBP14.32□□□□□ -0.12
RPAIN-217ENST00000575711 ACDQ96AP0 544 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 TRIM44Q96DX7 344 aaPredicted RBP14.32□□□□□ -0.12
RPAIN-217ENST00000575711 HES6Q96HZ4 224 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 CELF6Q96J87 481 aaKnown RBP14.32□□□□□ -0.12
RPAIN-217ENST00000575711 RNF157Q96PX1 679 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 PSMB7Q99436 277 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 NOL6Q9H6R4 1146 aaKnown RBP14.32□□□□□ -0.12
RPAIN-217ENST00000575711 LRRC19Q9H756 370 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 PRDM16Q9HAZ2 1276 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 ETNK2Q9NVF9 386 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 DLGAP2Q9P1A6 1054 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 THAP10Q9P2Z0 257 aaPredicted RBP14.32□□□□□ -0.12
RPAIN-217ENST00000575711 SLC25A13Q9UJS0 675 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 HPCAL4Q9UM19 191 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 MIA3Q5JRA6 1907 aa14.32□□□□□ -0.12
RPAIN-217ENST00000575711 ANTXRLA6NF34 631 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 ARHGAP42A6NI28 874 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 USP27XA6NNY8 438 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 CHURC1-FNTBB4DL54 471 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 CBX4O00257 560 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 KIF5CO60282 957 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 KLF8O95600 359 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-217ENST00000575711 SRPRAP08240 638 aaKnown RBP14.31□□□□□ -0.12
RPAIN-217ENST00000575711 ZFXP17010 805 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-217ENST00000575711 MSNP26038 577 aaKnown RBP14.31□□□□□ -0.12
RPAIN-217ENST00000575711 NTSR1P30989 418 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 NNMTP40261 264 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 CDKN2BP42772 138 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 CTSOP43234 321 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-217ENST00000575711 PEX5P50542 639 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 DNA2P51530 1060 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 COPS2P61201 443 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 GAS6Q14393 721 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 ZNF234Q14588 700 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 PTPRNQ16849 979 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 TFDP3Q5H9I0 405 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 EOGTQ5NDL2 527 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 MEI1Q5TIA1 1274 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 AFMIDQ63HM1 303 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 NCBP2-AS2Q69YL0 99 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 RETSATQ6NUM9 610 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 SERPINA13PQ6UXR4 307 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 CCDC33Q8N5R6 958 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 ALLCQ8N6M5 410 aa14.31□□□□□ -0.12
RPAIN-217ENST00000575711 NPWQ8N729 165 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms