RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 UGT2A3Q6UWM9 527 aa8.71□□□□□ -1.01
RPAIN-215ENST00000575112 ARPINQ7Z6K5 226 aa8.71□□□□□ -1.01
RPAIN-215ENST00000575112 NCSTNQ92542 709 aa8.71□□□□□ -1.01
RPAIN-215ENST00000575112 PHF21BQ96EK2 531 aa8.71□□□□□ -1.01
RPAIN-215ENST00000575112 KCTD15Q96SI1 283 aaPredicted RBP8.71□□□□□ -1.01
RPAIN-215ENST00000575112 STAP1Q9ULZ2 295 aa8.71□□□□□ -1.01
RPAIN-215ENST00000575112 POMPQ9Y244 141 aa8.71□□□□□ -1.01
RPAIN-215ENST00000575112 DRG1Q9Y295 367 aaKnown RBP8.71□□□□□ -1.01
RPAIN-215ENST00000575112 C2CD4BA6NLJ0 364 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 NDC80O14777 642 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 SIN3BO75182 1162 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 ASLP04424 464 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 ITGA2BP08514 1039 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 FAM163BP0C2L3 166 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 PMLP29590 882 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 HDAC4P56524 1084 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 CDKL1Q00532 357 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 HIC1Q14526 733 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 MYLK3Q32MK0 819 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 SPOUT1Q5T280 376 aaKnown RBP8.71□□□□□ -1.02
RPAIN-215ENST00000575112 ATG16L1Q676U5 607 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 KLHDC10Q6PID8 442 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 CHSY1Q86X52 802 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 MAPK15Q8TD08 544 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 PPP2R3CQ969Q6 453 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 ITFG2Q969R8 447 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 HSPBAP1Q96EW2 488 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 P2RY11Q96G91 374 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 SENP8Q96LD8 212 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 NR1H4Q96RI1 486 aaPredicted RBP8.71□□□□□ -1.02
RPAIN-215ENST00000575112 MROH8Q9H579 483 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 SYBUQ9NX95 663 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 F8W810 466 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 H3BSA7 217 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 VAPBO95292 243 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 MT-CYBP00156 380 aaPredicted RBP8.71□□□□□ -1.02
RPAIN-215ENST00000575112 UQCRBP14927 111 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 ERCC2P18074 760 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 ABCD1P33897 745 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 PKNOX1P55347 436 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 TBL3Q12788 808 aaKnown RBP8.71□□□□□ -1.02
RPAIN-215ENST00000575112 EFHC1Q5JVL4 640 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 PLEKHH3Q7Z736 793 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 SCAMP5Q8TAC9 235 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 TNIP3Q96KP6 325 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 CSPG4P5Q96PW8 444 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 TKTL2Q9H0I9 626 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 MMADHCQ9H3L0 296 aaPredicted RBP8.71□□□□□ -1.02
RPAIN-215ENST00000575112 PIF1Q9H611 641 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 WDR55Q9H6Y2 383 aaPredicted RBP8.71□□□□□ -1.02
RPAIN-215ENST00000575112 CHRAC1Q9NRG0 131 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 CDH22Q9UJ99 828 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 EMCNQ9ULC0 261 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 COL4A5P29400 1685 aa8.71□□□□□ -1.02
RPAIN-215ENST00000575112 ZNF638Q14966 1978 aaKnown RBP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 YJEFN3A6XGL0 299 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 TFPTP0C1Z6 253 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 ATXN8OSP0DMR3 200 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 CSE1LP55060 971 aaKnown RBP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 MRPS22P82650 360 aaKnown RBP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 SOX4Q06945 474 aaPredicted RBP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 NSUN2Q08J23 767 aaKnown RBP eCLIP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 TRMT5Q32P41 509 aaKnown RBP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 ZNF280DQ6N043 979 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 EXOC8Q8IYI6 725 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 PQLC3Q8N755 202 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 CEP70Q8NHQ1 597 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 NPLOC4Q8TAT6 608 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 FAM110BQ8TC76 370 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 PRPF18Q99633 342 aaKnown RBP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 DNAI2Q9GZS0 605 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 XAB2Q9HCS7 855 aaKnown RBP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 LTBP1Q14766 1721 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 ATP6AP2A0A1C7CYW4 349 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 UBA6A0AVT1 1052 aaPredicted RBP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 A8MX80 341 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 ZBTB42B2RXF5 422 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 FAM72CH0Y354 149 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 PMM2O15305 246 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 TPST1O60507 370 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 ATP6AP2O75787 350 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 TGDSO95455 350 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 STAMBPO95630 424 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 APOEP02649 317 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 PABPC4LP0CB38 370 aaKnown RBP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 YBX3P16989 372 aaKnown RBP eCLIP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 TKTP29401 623 aaKnown RBP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 GJA5P36382 358 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 FAM72AQ5TYM5 149 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 BTBD8Q5XKL5 378 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 FAM72DQ6L9T8 149 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 DRICH1Q6PGQ1 229 aaPredicted RBP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 ACAD11Q709F0 780 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 AMIGO2Q86SJ2 522 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 IFNEQ86WN2 208 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 FAM72BQ86X60 149 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 LILRA2Q8N149 483 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 KLHL5Q96PQ7 755 aa8.7□□□□□ -1.02
RPAIN-215ENST00000575112 FAM193BQ96PV7 902 aaPredicted RBP8.7□□□□□ -1.02
RPAIN-215ENST00000575112 SYT17Q9BSW7 474 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms