RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 VANGL2Q9ULK5 521 aa15.67■□□□□ 0.1
CTNS-209ENST00000574776 PCDHGC3Q9UN70 934 aa15.67■□□□□ 0.1
CTNS-209ENST00000574776 KNTC1P50748 2209 aa15.67■□□□□ 0.1
CTNS-209ENST00000574776 APC2O95996 2303 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.66■□□□□ 0.1
CTNS-209ENST00000574776 A0A1W2PR77 199 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 TRABD2BA6NFA1 517 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 FOXN3O00409 490 aaPredicted RBP15.66■□□□□ 0.1
CTNS-209ENST00000574776 ERBB2P04626 1255 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 DRD3P35462 400 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 CLCN1P35523 988 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 KRT9P35527 623 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 GGCXP38435 758 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 MTIF2P46199 727 aaKnown RBP15.66■□□□□ 0.1
CTNS-209ENST00000574776 SLC6A3Q01959 620 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 ZNF177Q13360 481 aaPredicted RBP15.66■□□□□ 0.1
CTNS-209ENST00000574776 DHRS13Q6UX07 377 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 C14orf80Q86SX3 495 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 GALNT15Q8N3T1 639 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 C1orf131Q8NDD1 294 aaKnown RBP15.66■□□□□ 0.1
CTNS-209ENST00000574776 NOX5Q96PH1 765 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 SPAG5Q96R06 1193 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 PPP1R9BQ96SB3 815 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 SIK2Q9H0K1 926 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 SIX2Q9NPC8 291 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 PLCB1Q9NQ66 1216 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 FTSJ1Q9UET6 329 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 DNAJC12Q9UKB3 198 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 SARDHQ9UL12 918 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 GPSM3Q9Y4H4 160 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 HS3ST4Q9Y661 456 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 NBEAQ8NFP9 2946 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 LAMA5O15230 3695 aa15.66■□□□□ 0.1
CTNS-209ENST00000574776 ADAMTS20P59510 1910 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 GTPBP10A4D1E9 387 aaKnown RBP15.65■□□□□ 0.1
CTNS-209ENST00000574776 M0QYT0 321 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 TLR4O00206 839 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 CBX4O00257 560 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 ATP9BO43861 1147 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 RTN2O75298 545 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 PAGE1O75459 146 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 ITGAVP06756 1048 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 PNMA6AP0CW24 399 aaPredicted RBP15.65■□□□□ 0.1
CTNS-209ENST00000574776 ZNF18P17022 549 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 MAT2AP31153 395 aaKnown RBP15.65■□□□□ 0.1
CTNS-209ENST00000574776 RNASE9P60153 205 aaKnown RBP15.65■□□□□ 0.1
CTNS-209ENST00000574776 PPP2CBP62714 309 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 PPP2CAP67775 309 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 DLG2Q15700 870 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 INAVAQ3KP66 663 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 POM121L1PQ3SYA9 428 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 PTPN20Q4JDL3 420 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 OLFML1Q6UWY5 402 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 PRPF39Q86UA1 669 aaKnown RBP15.65■□□□□ 0.1
CTNS-209ENST00000574776 SLC47A2Q86VL8 602 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 SAP25Q8TEE9 199 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 OR8D1Q8WZ84 308 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 SYNCQ9H7C4 482 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 GDF3Q9NR23 364 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 ARHGAP20Q9P2F6 1191 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 SLC25A13Q9UJS0 675 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 RAXQ9Y2V3 346 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 OR51B4Q9Y5P0 310 aa15.65■□□□□ 0.1
CTNS-209ENST00000574776 TP53BP1Q12888 1972 aaPredicted RBP15.65■□□□□ 0.1
CTNS-209ENST00000574776 URB1O60287 2271 aaKnown RBP15.65■□□□□ 0.1
CTNS-209ENST00000574776 ITPR1Q14643 2758 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 DOCK9Q9BZ29 2069 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 BNIP3LO60238 219 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 LDOC1O95751 146 aaPredicted RBP15.64■□□□□ 0.09
CTNS-209ENST00000574776 NOS2P35228 1153 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 VASPP50552 380 aaPredicted RBP15.64■□□□□ 0.09
CTNS-209ENST00000574776 SNX16P57768 344 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 CYP4F3Q08477 520 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 BNIP3Q12983 259 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 SMAD1Q15797 465 aaKnown RBP15.64■□□□□ 0.09
CTNS-209ENST00000574776 TPD52L1Q16890 204 aaPredicted RBP15.64■□□□□ 0.09
CTNS-209ENST00000574776 SLC45A4Q5BKX6 768 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 FAM46CQ5VWP2 391 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 SLC26A9Q7LBE3 791 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 DSG4Q86SJ6 1040 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 EID2Q8N6I1 236 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 HNRNPLLQ8WVV9 542 aaKnown RBP15.64■□□□□ 0.09
CTNS-209ENST00000574776 VPS28Q9UK41 221 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 PPM1HQ9ULR3 514 aa15.64■□□□□ 0.09
CTNS-209ENST00000574776 TPX2Q9ULW0 747 aaKnown RBP15.64■□□□□ 0.09
CTNS-209ENST00000574776 NYNRINQ9P2P1 1898 aaKnown RBP15.63■□□□□ 0.09
CTNS-209ENST00000574776 FAM170AA1A519 330 aa15.63■□□□□ 0.09
CTNS-209ENST00000574776 ENC1O14682 589 aa15.63■□□□□ 0.09
CTNS-209ENST00000574776 MCF2LO15068 1137 aa15.63■□□□□ 0.09
CTNS-209ENST00000574776 LATO43561 262 aa15.63■□□□□ 0.09
CTNS-209ENST00000574776 CLDN11O75508 207 aa15.63■□□□□ 0.09
CTNS-209ENST00000574776 DAB1O75553 588 aa15.63■□□□□ 0.09
CTNS-209ENST00000574776 CNTN5O94779 1100 aa15.63■□□□□ 0.09
CTNS-209ENST00000574776 ADCY5O95622 1261 aa15.63■□□□□ 0.09
CTNS-209ENST00000574776 MT-CO1P00395 513 aa15.63■□□□□ 0.09
CTNS-209ENST00000574776 TFE3P19532 575 aaPredicted RBP15.63■□□□□ 0.09
CTNS-209ENST00000574776 NXPH1P58417 271 aa15.63■□□□□ 0.09
CTNS-209ENST00000574776 UBE2HP62256 183 aa15.63■□□□□ 0.09
CTNS-209ENST00000574776 CNTN1Q12860 1018 aa15.63■□□□□ 0.09
CTNS-209ENST00000574776 DNAJC3Q13217 504 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms