RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 PRDM16Q9HAZ2 1276 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 FAM32AQ9Y421 112 aaKnown RBP14.7□□□□□ -0.06
SMG6-215ENST00000574501 ARID2Q68CP9 1835 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 A0A087WXM4 84 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 TRIM38O00635 465 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 SPTLC1O15269 473 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 PDGFRAP16234 1089 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 EPHX2P34913 555 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 KPNA1P52294 538 aaPredicted RBP14.7□□□□□ -0.06
SMG6-215ENST00000574501 GTF2A2P52657 109 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 TRPC3Q13507 836 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 CYP2A13Q16696 494 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 MAP7D1Q3KQU3 841 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 CCDC153Q494R4 210 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 NHSL2Q5HYW2 709 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 EGFLAMQ63HQ2 1017 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 OLFML1Q6UWY5 402 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 DCLK2Q8N568 766 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 RXFP2Q8WXD0 754 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 FZD1Q9UP38 647 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 CORINQ9Y5Q5 1042 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 MYO18AQ92614 2054 aaKnown RBP14.69□□□□□ -0.06
SMG6-215ENST00000574501 BRWD3Q6RI45 1802 aa14.69□□□□□ -0.06
SMG6-215ENST00000574501 TIPRLO75663 272 aa14.69□□□□□ -0.06
SMG6-215ENST00000574501 LDHAP00338 332 aaKnown RBP14.69□□□□□ -0.06
SMG6-215ENST00000574501 ICAM1P05362 532 aa14.69□□□□□ -0.06
SMG6-215ENST00000574501 ASPAP45381 313 aa14.69□□□□□ -0.06
SMG6-215ENST00000574501 BMXP51813 675 aa14.69□□□□□ -0.06
SMG6-215ENST00000574501 ZNF143P52747 638 aaPredicted RBP14.69□□□□□ -0.06
SMG6-215ENST00000574501 RPS6P62753 249 aaKnown RBP14.69□□□□□ -0.06
SMG6-215ENST00000574501 TFAMQ00059 246 aaKnown RBP14.69□□□□□ -0.06
SMG6-215ENST00000574501 GBE1Q04446 702 aa14.69□□□□□ -0.06
SMG6-215ENST00000574501 TANKQ92844 425 aa14.69□□□□□ -0.06
SMG6-215ENST00000574501 APBA2Q99767 749 aa14.69□□□□□ -0.06
SMG6-215ENST00000574501 NPLQ9BXD5 320 aaPredicted RBP14.69□□□□□ -0.06
SMG6-215ENST00000574501 CDH7Q9ULB5 785 aa14.69□□□□□ -0.06
SMG6-215ENST00000574501 TCAF2A6NFQ2 919 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 KCNU1A8MYU2 1149 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 E7ENX8 843 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 H0YJX3 145 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 HDAC3O15379 428 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 TRIM13O60858 407 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 CLIC3O95833 236 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 INHBBP09529 407 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 TPSB2P20231 275 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 PGGT1BP53609 377 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 PRKCEQ02156 737 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 GNA12Q03113 381 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 TRIM25Q14258 630 aaKnown RBP14.68□□□□□ -0.06
SMG6-215ENST00000574501 NR1D2Q14995 579 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 TPSAB1Q15661 275 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 ZNF699Q32M78 642 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 TREML2Q5T2D2 321 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 SLFN12LQ6IEE8 588 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 MAMDC4Q6UXC1 1216 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 GK5Q6ZS86 529 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 NETO2Q8NC67 525 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 UBA3Q8TBC4 463 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 ASB9Q96DX5 294 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 MAGEB5Q9BZ81 275 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 ZBTB26Q9HCK0 441 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 KIAA1522Q9P206 1035 aaPredicted RBP14.68□□□□□ -0.06
SMG6-215ENST00000574501 SFMBT1Q9UHJ3 866 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 ZDHHC2Q9UIJ5 367 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 TMED5Q9Y3A6 229 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 SAC3D1A6NKF1 404 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 SOBPA7XYQ1 873 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 GRID2O43424 1007 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 C8BP07358 591 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 TFEBP19484 476 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 GPD1P21695 349 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 TGM2P21980 687 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 HOXA10P31260 410 aaPredicted RBP14.68□□□□□ -0.06
SMG6-215ENST00000574501 NME3Q13232 169 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 ITGADQ13349 1161 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 ITGA7Q13683 1181 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 STEAP4Q687X5 459 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 CHSY3Q70JA7 882 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 CCDC60Q8IWA6 550 aaPredicted RBP14.68□□□□□ -0.06
SMG6-215ENST00000574501 LPGAT1Q92604 370 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 TFAP2CQ92754 450 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 AGAP3Q96P47 875 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 RMDN3Q96TC7 470 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 TCHPQ9BT92 498 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 LHX5Q9H2C1 402 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 RAVER2Q9HCJ3 691 aaKnown RBP14.68□□□□□ -0.06
SMG6-215ENST00000574501 NGRNQ9NPE2 291 aaKnown RBP14.68□□□□□ -0.06
SMG6-215ENST00000574501 HMGXB4Q9UGU5 601 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 COPG1Q9Y678 874 aaKnown RBP14.68□□□□□ -0.06
SMG6-215ENST00000574501 SLX4Q8IY92 1834 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 ADGRA2Q96PE1 1338 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 BPTFQ12830 3046 aa14.68□□□□□ -0.06
SMG6-215ENST00000574501 PIGNO95427 931 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 GRM5P41594 1212 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 RPL14P50914 215 aaKnown RBP14.67□□□□□ -0.06
SMG6-215ENST00000574501 RAB15P59190 212 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 PSME3P61289 254 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 RHDQ02161 417 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 RAB39AQ14964 217 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 EMC2Q15006 297 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms