RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 STK19P49842 368 aaPredicted RBP16.23■□□□□ 0.19
CHD3-215ENST00000572750 SLC25A11Q02978 314 aaKnown RBP16.23■□□□□ 0.19
CHD3-215ENST00000572750 ENPP2Q13822 863 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 KCNT1Q5JUK3 1230 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 SDE2Q6IQ49 451 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 RAD9BQ6WBX8 426 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 NLRP14Q86W24 1093 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 TMTC1Q8IUR5 882 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 TMEM139Q8IV31 216 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 CCDC170Q8IYT3 715 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 CAMKK1Q8N5S9 505 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 SLC35G2Q8TBE7 412 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 HMGB4Q8WW32 186 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 RFFLQ8WZ73 363 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 TTC17Q96AE7 1141 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 KCTD15Q96SI1 283 aaPredicted RBP16.23■□□□□ 0.19
CHD3-215ENST00000572750 EPAS1Q99814 870 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 BAG1Q99933 345 aaPredicted RBP16.23■□□□□ 0.19
CHD3-215ENST00000572750 FEM1AQ9BSK4 669 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 TPSD1Q9BZJ3 242 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 ZWILCHQ9H900 591 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 GRPEL1Q9HAV7 217 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 CD248Q9HCU0 757 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 NDFIP2Q9NV92 336 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 VPS28Q9UK41 221 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 PLA2G4CQ9UP65 541 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 PCDHGA2Q9Y5H1 932 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 CHD5Q8TDI0 1954 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 NPC1O15118 1278 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 NDUFA10O95299 355 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 ASLP04424 464 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 EPHX1P07099 455 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 RHOQP17081 205 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 EPHB2P29323 1055 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 GJC1P36383 396 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 SSR1P43307 286 aaKnown RBP16.22■□□□□ 0.19
CHD3-215ENST00000572750 MAGEA1P43355 309 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 OXCT1P55809 520 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 TPI1P60174 286 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 SRSF5Q13243 272 aaKnown RBP16.22■□□□□ 0.19
CHD3-215ENST00000572750 SLC12A1Q13621 1099 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 STARD3Q14849 445 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 ACAP1Q15027 740 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 SPA17Q15506 151 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 PPP6R3Q5H9R7 873 aaPredicted RBP16.22■□□□□ 0.19
CHD3-215ENST00000572750 C6orf118Q5T5N4 469 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 ERMARDQ5T6L9 678 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 TXNRD3NBQ6F5E7 133 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 ZC3H14Q6PJT7 736 aaKnown RBP16.22■□□□□ 0.19
CHD3-215ENST00000572750 SETD3Q86TU7 594 aaPredicted RBP16.22■□□□□ 0.19
CHD3-215ENST00000572750 CACUL1Q86Y37 369 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 ZBTB44Q8NCP5 570 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 OR7D4Q8NG98 312 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 HSPH1Q92598 858 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 ALG14Q96F25 216 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 MYO19Q96H55 970 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 RPL10LQ96L21 214 aaKnown RBP16.22■□□□□ 0.19
CHD3-215ENST00000572750 MRGPRX3Q96LB0 322 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 FAM126AQ9BYI3 521 aaPredicted RBP16.22■□□□□ 0.19
CHD3-215ENST00000572750 SLC6A17Q9H1V8 727 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 TMEM245Q9H330 911 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 POLMQ9NP87 494 aaPredicted RBP16.22■□□□□ 0.19
CHD3-215ENST00000572750 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHD3-215ENST00000572750 TMEM248Q9NWD8 314 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 BCCIPQ9P287 314 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHD3-215ENST00000572750 DNAI1Q9UI46 699 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 ERVW-1Q9UQF0 538 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 PCDHA13Q9Y5I0 950 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 OR51B4Q9Y5P0 310 aa16.22■□□□□ 0.19
CHD3-215ENST00000572750 GOLGA6L3A6NEY3 463 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 EIF3CLB5ME19 914 aaKnown RBP16.21■□□□□ 0.19
CHD3-215ENST00000572750 AXIN1O15169 862 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 PROSCO94903 275 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 GABRG2P18507 467 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 HOXA6P31267 233 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 PLK1P53350 603 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 NRLP54845 237 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 ECT2LQ008S8 904 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 WDR5BQ86VZ2 330 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 LONP2Q86WA8 852 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 RASSF3Q86WH2 238 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 RHOT2Q8IXI1 618 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 ACRBPQ8NEB7 543 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 ATRIPQ8WXE1 791 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 PSMB7Q99436 277 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 EIF3CQ99613 913 aaKnown RBP16.21■□□□□ 0.19
CHD3-215ENST00000572750 NCAPGQ9BPX3 1015 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 MTG2Q9H4K7 406 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 INTUQ9ULD6 942 aa16.21■□□□□ 0.19
CHD3-215ENST00000572750 REXO2Q9Y3B8 237 aaKnown RBP16.21■□□□□ 0.19
CHD3-215ENST00000572750 EPN1Q9Y6I3 576 aaPredicted RBP16.21■□□□□ 0.19
CHD3-215ENST00000572750 PLXND1Q9Y4D7 1925 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 DSPP15924 2871 aaKnown RBP16.2■□□□□ 0.18
CHD3-215ENST00000572750 ILVBLA1L0T0 632 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 EEF2KO00418 725 aaKnown RBP16.2■□□□□ 0.18
CHD3-215ENST00000572750 SYNCRIPO60506 623 aaKnown RBP16.2■□□□□ 0.18
CHD3-215ENST00000572750 SNAP91O60641 907 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 MTA2O94776 668 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 ALDH1A2O94788 518 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 GOT1P17174 413 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms